CCDS Report for Consensus CDS

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Report for CCDS37723.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
37723.1	Public	Mus musculus	18	Arhgap12	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37723.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000182559.7	ENSMUSP00000138585.1	Accepted	alive
		NCBI	NM_001039692.1	NP_001034781.1	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001034781.1	838	Q8C0D4	838	100%	0	0

Chromosomal Locations for CCDS 37723.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)

Genome Browser links:

Chromosome	Start	Stop
18	6026556	6026730
18	6027575	6027677
18	6027960	6028094
18	6028194	6028271
18	6031730	6031828
18	6033141	6033257
18	6034450	6034552
18	6037018	6037116
18	6039354	6039455
18	6049277	6049358
18	6052862	6052923
18	6057517	6057591
18	6061847	6061972
18	6064341	6064421
18	6065705	6065845
18	6069831	6070091
18	6111685	6112362

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2517 nt):
ATGGCCGAGAGAAGTGGAAAGATCACTGCAGGACAAGCGTATATTGAGGTGGAGTATGATTATGAGTATG ACGCAAAGGACAGAAAGATTGTGATCAGACAAGGGGAGCGCTACCTCCTGGTGAAGAAGACCAATGATGA CTGGTGGCAAGTCAGACCTGATGAGAACTCAAAAGCATTTTATGTGCCAGCACAGTATGTCAAGGAGGTC ACTCGCAAAGCTCTGATGCCACCTGTGAAGCAGGCAACAGGACTGCCAAATAACTCTATGAAGACAATAC AGAGTATGCATCTCCAGAGATCGACAGAAAATGTGAACAAAATGCCTGAGCTTTCAAGTTTTGGAAAGCC ATCGTCATCTGTTCAAGGAACAGGTCTTATTCGTGATGCCAATCAGAATTTCGGATCCAATTATAATTCA GGCCAGACTCTCAACCTAAGCCTGGACCTGACCCATAATAATGGAAAGTTTAACAGTGACTCACATTCTC CTAAAGTTTCCAGCCAGAATAGGACACGCTTATTTGGTCATTTTCCCGGGCCAGAGTTCTTGGACATAGA GAAAACTAGCTTCTCTCAGGAACAGTCATGTGACTCAGCTGGAGAAGGCTCCGAAAGAATACAGCAGGAT TCCGAGTCTGGAGATGAACTTAGCAGCAGCTCCACTGAGCAGATGAGGGCAACCACACCCCCTAATCAAG GAAGGCCAGATTCTCCAGTCTATGCTAACCTACAGGAACTGAAAATATCACAGTCTGCTCTTCCTCCTCT TCCTGGGAGCCCAGCAATTCAAGTTAATGGGGAATGGGAGACTCACAAAGACAGTTCAGGCCGTTGTTAC TACTATAACCGCACAACCCAGGAGCGAACCTGGAAACCACCTCGATGGGCTCGAGATGTGAGCACAAGCC GAGATTTTCAGAGCCCAGGAGAGCAAGAGCCTCTTTCATCAGAAGAAAACTACCACAGCAGTTGTTTCAG CCAGTCAGATAGTCAGTGTGGCTCTCCTCCCAGGGGTTGGTCAGAAGAGCTGGATGAACGTGGGCATACC TTGTATACCAGTGACTATACTAAGGAAAAGTGGCTCAAGCATGTTGATGATCAAGGTAGACAGTATTACT ACAGCGCAGATGGATCTCGGTCAGAGTGGGAATTGCCAAAGTATAATGCTTCATCTCAGCAGCAAAGAGA AATAATTAAAAGTAGGAGCTTGGACAGGCGGCTGCAAGAACCAATAGTGTTAACTAAATGGAGACATAGC ACCATTGTGTTGGACTCCAACGACAAGGATTCTCCAACTACCACAAAACTCTGCTTACCTGAAAATGAAT CTCCTCCTACTTCATCAAAGCATCAAGATCCAGGTCAGGAGAAATATGGACTGTTAAATGTAACAAAAAT TACTGAAAATGGGAAAAAAGTTCGAAAGAACTGGTTGTCTTCTTGGGCAGTGCTGCAGGGTTCGTCTTTA CTTTTTACGAAAACTCAAGGAAGTAGTACAAGCTGGTTTGGGAGTAATCAGTCCAAACCAGAATTCACAG TGGACCTGAAGGGGGCAGTGATTGAAATGGCATCAAAGGACAAATCGAGCAAGAAGAATGTATTTGAGCT GAAAACTCGACAAGGAACAGAACTGCTAATTCAGTCTGATAATGATGCTGTTATTAATGATTGGTTTAAA GTTCTTAGTAGTACTATCAATAACCAGGTAGCAGAGGCCGATGAAGCAGCTGAAGAGGAAACACCAGATT CACCAGGGGTAGAAAAGCATGATAAAGAAAAGGACCAGAAGGAGCTTAAAAAACTTCGCTCAATGAAAGG ATCCAGCATGGATTCTTCAGAGCAGAAGAAAACTAAGAAAAACTTAAAGAAGTTTCTTACCCGGCGCCCC ACTTTGCAAGCTGTTCGTGAGAAAGGTTATATCAAAGATCAAGTATTTGGATCTAATCTTGCTAATCTGT GTCAGAGGGAGAATGGGACAGTGCCAAAGTTTGTGAAGTTATGCATTGAGCATGTCGAAGAGCATGGTTT AGATGTTGATGGTATTTACAGAGTGAGTGGCAACCTTGCCGTGATCCAGAAGCTGAGGTTCGCAGTCAAT CATGATGAGAAGTTGGACTTGAATGACAGTAAATGGGAAGACATTCATGTCATCACGGGAGCACTCAAAA TGTTTTTTCGAGAACTACCAGAACCTCTTTTTACGTTTAATCATTTCAATGATTTTGTTAATGCAATTAA ACAAGAACCGAGACAGCGTGTCACTGCAGTTAAGGACCTAATCAGACAGTTGCCAAAGCCAAATCAAGAT ACAATGCAGATTCTGTTTAGACATCTCAAAAGGGTTATAGAAAATGGAGAAAAAAACCGAATGACCTATC AGAGCATAGCGATTGTTTTTGGCCCCACCCTTCTAAAGCCAGAAAGAGAGACTGGTAATATAGCAGTTCA TACTGTGTACCAGAACCAGATTGTAGAGCTGATTCTCCTGGAATTAAGCACTGTCTTTGGACGTTGA
Translation (838 aa):
MAERSGKITAGQAYIEVEYDYEYDAKDRKIVIRQGERYLLVKKTNDDWWQVRPDENSKAFYVPAQYVKEV TRKALMPPVKQATGLPNNSMKTIQSMHLQRSTENVNKMPELSSFGKPSSSVQGTGLIRDANQNFGSNYNS GQTLNLSLDLTHNNGKFNSDSHSPKVSSQNRTRLFGHFPGPEFLDIEKTSFSQEQSCDSAGEGSERIQQD SESGDELSSSSTEQMRATTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAIQVNGEWETHKDSSGRCY YYNRTTQERTWKPPRWARDVSTSRDFQSPGEQEPLSSEENYHSSCFSQSDSQCGSPPRGWSEELDERGHT LYTSDYTKEKWLKHVDDQGRQYYYSADGSRSEWELPKYNASSQQQREIIKSRSLDRRLQEPIVLTKWRHS TIVLDSNDKDSPTTTKLCLPENESPPTSSKHQDPGQEKYGLLNVTKITENGKKVRKNWLSSWAVLQGSSL LFTKTQGSSTSWFGSNQSKPEFTVDLKGAVIEMASKDKSSKKNVFELKTRQGTELLIQSDNDAVINDWFK VLSSTINNQVAEADEAAEEETPDSPGVEKHDKEKDQKELKKLRSMKGSSMDSSEQKKTKKNLKKFLTRRP TLQAVREKGYIKDQVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDVDGIYRVSGNLAVIQKLRFAVN HDEKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIKQEPRQRVTAVKDLIRQLPKPNQD TMQILFRHLKRVIENGEKNRMTYQSIAIVFGPTLLKPERETGNIAVHTVYQNQIVELILLELSTVFGR

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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