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Report for CCDS37954.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37954.1 Public Mus musculus 19 Ranbp6 23 108 98 CCDS HistoryNCBI Gene:240614Re-query CCDS DB by CCDS ID:37954.1Re-query CCDS DB by GeneID:240614See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37954.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099525.4 ENSMUSP00000100503.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099525.4Link to Ensembl Protein Viewer:ENSMUSP00000100503.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000099525Re-query CCDS DB by Protein ID:ENSMUSP00000100503
Original member Current member NCBI NM_177721.4 NP_808389.2 Accepted alive Link to Nucleotide Sequence:NM_177721.4Link to Protein Sequence:NP_808389.2Re-query CCDS DB by Nucleotide ID:NM_177721Re-query CCDS DB by Protein ID:NP_808389Link to BLAST:NP_808389.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808389.2 1105 Q8BIV3 1105 100% 0 0

Chromosomal Locations for CCDS 37954.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 29809633 29812950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3318 nt):
ATGGCGGCGGCCGGGTCTGCAGGGTTGCCGGCGACCGTGTCGGAAAAGCAGGAGTTTTACCAGCTTCTGA
AG
AACCTGATCAATCCAAGCTGCATGGTGCGGAGGCAAGCCGAGGAGGTCTATGAGAATATCCCAGGTCT
G
TGTAAGACTACATTTCTCTTAGACGCCGTCCGAAATAGAAGAGCAGGTTATGAGGTGAGACAAATGGCT
GCC
GCACTGCTACGACGGCTTTTGTCCTCAGGGTTTGAGGAGGTCTATCCAAATCTACCTCCTGAAGTGC
AG
AGGGATGTCAAGATTGAACTGATACTGGCCGTTAAGTTAGAAACACATGCTAGCATGAGGAAAAAGCT
T
TGTGATATTTTTGCGGTGCTGGCCAGGAATTTGATAGATGAGAGTGGCACTAACCATTGGCCAGAAGGT
CTG
AAATTCCTCATTGATTCGATTCACTCTAAAAATGTGGTTCTGTGGGAAGTTGCACTTCACGTTTTCT
GG
CACTTTCCTGGGATTTTTGGGAACCAGGATCGTCACGATTTGGATATCATCAAGAGGTTGTTGGACCA
G
TGTATTCAAGATCAGGAGCATCCAGCAATCAGGACATTATCTGCTAGAGCTGCAGCTACGTTCGTCCTT
GCT
AATGAAAACAATATTGCTCTTTTCAAAGACTTTGCGGATTTGCTTCCTGGGATCTTACAGGCTGTGA
AT
GATTCCTGCTACCAGGATGATGATTCTGTGCTAGAATCCCTTGTTGAGATTGCAGATACTGTACCTAA
G
TACTTGGGTCCCTATCTAGAAGATACTCTGCAGTTGAGCCTGAAGTTGTGTGGAGACTCTAGGCTTAGT
AAC
CTGCAACGCCAGCTGGCTCTGGAAGTAATAGTCACCTTATCTGAAACTGCAACTCCAATGTTGAAAA
AG
CATACGAATATTATTGCACAGGCTGTGCCTCATATATTAGCAATGATGGTTGATCTTCAAGATGATGA
T
GACTGGGTAAATGCTGATGAAATGGAAGAAGATGACTTTGACAGCAATGCGGTTGCTGCTGAGAGTGCC
CTA
GACAGACTGGCTTGTGGACTTGGTGGGAAAGTTGTTTTGCCAATGACCAAGGAGCATATCATGCAGA
TG
CTTCAGAGCCCTGACTGGAAATGTCGACACGCCGGATTAATGGCCTTATCAGCCATTGGAGAAGGTTG
C
CATCAGCAAATGGAACCAATTCTAGATGAAACAGTTAACTCGGTTTTACTTTTTCTTCAGGATCCTCAT
CCA
AGGGTAAGGGCTGCTGCCTGTACTACACTTGGACAGATGGCTACAGATTTTGCACCTAGTTTCCAAA
AG
AAATTCCATGAGATAGTGATTACAGCTTTGTTGCGAACCATGGAAAACCAAGGTAATCAACGTGTGCA
A
TCTCACGCAGCTTCTGCTCTTGTTATTTTTATTGAAGACTGCCCCAAGTCATTGCTAATTCTATATTTG
GAA
AATATGGTAAAAAGTCTCCATTCCATCTTGGTAATTAAACTTCAAGAGCTGATTCGGAATGGAACTA
AG
TTGGCCTTAGAACAACTTGTGACAACCATTGCTTCCGTTGCAGATGCAATAGAAGAAAGCTTTATTCC
A
TATTATGATATATTTATGCCCTCACTCAAACACGTTGTTGAGCTCGCTGTTCAAAAGGAACTCAAGCTT
CTT
CGAGGAAAAACTATTGAATGCATTAGCCATGTTGGACTTGCCGTTGGGAAGGAAAAATTTATGCAAG
AT
GCATCAAATGTGATGCAGTTACTGTTGAAAACACAATCAGACTTAAATAACATGGAAGATGATGACCC
T
CAGACTTCTTACATGGTTTCAGCCTGGGCTAGAATGTGTAAAATCCTTGGCAAAGACTTTGAGCAATAT
CTC
CCACTGGTTATTGAGCCACTTATCAAGACTGCTTCAGCTAAGCCTGATGTCGCTCTCTTAGACACAC
AG
GATGTGGAGAACATGAGTGACGACGATGGCTGGCAGTTTGTAAACCTCGGAGACCAGCAAAGCTTTGG
C
ATCAAAACTTCAGGACTTGAAGCAAAAGCAACTGCTTGCCAGATGTTGGTTTACTATGCGAAGGAGTTA
AGA
GAAGGATTTGTGGAATACACGGAACAAGTTGTGAAGATGATGGTTCCTCTGCTGAAATTTTATTTTC
AT
GACAATGTTCGAGTGGCAGCTGCGGAAGCCATGCCCTTTCTCTTGGAATGTGCAAGAATTCGTGGCTC
A
GAGTATCTTTCACAGATGTGGCAGTTTATATGTGATCCCTTAATCAAGGCAATTGGAACTGAACCTGAT
ACA
GATGTACTCTCAGAAATAATGAATTCTTTTGCCAAGTCCATTGAGGTCATGGGAGATGGTTGCCTCA
AC
GATGAACACTTGGAAGAACTGGGAGGAATTTTGAAGGCAAAACTTGAAGGGCACTTTAAAAACCAAGA
G
TTACGGCAAGTAAAAAGGCAAGAAGAAAATTATGACCAACAGGTTGAAATGTCTCTTCAAGATGAGGAT
GAA
TGTGATGTTTATATTCTGACCAAAGTATCAGATATTTTGCACTCATTATTTAGTACTTACAAGGAAA
AA
ATTTTGCCATGGTTTGAGCAGCTACTCCCACTAATTGTAAATCTAATTTGTTCAAGTAGGCCATGGCC
A
GACAGACAATGGGGACTATGCATATTTGATGACATCATAGAGCATTGCAGTCCAACCTCATTCAAGTAT
GTT
GAGTATTTCCGGTGGCCGATGCTTCTCAATATGCGAGACAACAACCCTGAAGTCAGACAAGCTGCTG
CT
TATGGACTGGGAGTCATGGCACAGTTTGGTGGAGATGACTACCGTTCCTTGTGTTCAGAAGCCGTTCC
A
CTCTTGGTAAAAGTTATTAAGTGTGCAAATTCCAAAACCAAAAAGAATGTGATTGCTACAGAGAACTGT
ATC
TCAGCAATCGGAAAGATTCTGAAGTTTAAGCCCAACTGTGTAAATGTGGATGAAGTTCTCCCACACT
GG
TTATCGTGGCTTCCGCTGCATGAAGATAAAGAAGAAGCTATTCAGACTTTGAATTTTCTCTGTGACCT
A
ATTGAAAGCAACCACCCAGTTGTGATTGGTCCAAATAATTCCAATCTTCCCAAAATCATCAGTATAATC
GCA
GAAGGAAAAATTAATGAAACTATTAGCCATGAAGACCCCTGTGCCAAACGCCTAGCTAATGTTGTCC
GT
CAGATACAGACTTCTGAAGAATTGTGGTTGGAATGCACATCTCAACTCGATGATGAGCAGCAGGAAGC
T
TTACATGAGTTACTCAGTTTTGCTTGA


Translation (1105 aa):
MAAAGSAGLPATVSEKQEFYQLLKNLINPSCMVRRQAEEVYENIPGLCKTTFLLDAVRNRRAGYEVRQMA
A
ALLRRLLSSGFEEVYPNLPPEVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDESGTNHWPEG
L
KFLIDSIHSKNVVLWEVALHVFWHFPGIFGNQDRHDLDIIKRLLDQCIQDQEHPAIRTLSARAAATFVL
A
NENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLS
N
LQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDDDWVNADEMEEDDFDSNAVAAESA
L
DRLACGLGGKVVLPMTKEHIMQMLQSPDWKCRHAGLMALSAIGEGCHQQMEPILDETVNSVLLFLQDPH
P
RVRAAACTTLGQMATDFAPSFQKKFHEIVITALLRTMENQGNQRVQSHAASALVIFIEDCPKSLLILYL
E
NMVKSLHSILVIKLQELIRNGTKLALEQLVTTIASVADAIEESFIPYYDIFMPSLKHVVELAVQKELKL
L
RGKTIECISHVGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILGKDFEQY
L
PLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKEL
R
EGFVEYTEQVVKMMVPLLKFYFHDNVRVAAAEAMPFLLECARIRGSEYLSQMWQFICDPLIKAIGTEPD
T
DVLSEIMNSFAKSIEVMGDGCLNDEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDED
E
CDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKY
V
EYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENC
I
SAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHPVVIGPNNSNLPKIISII
A
EGKINETISHEDPCAKRLANVVRQIQTSEELWLECTSQLDDEQQEALHELLSFA




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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