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Report for CCDS80864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80864.1 Public Mus musculus 8 Ank1 23 108 98 CCDS HistoryNCBI Gene:11733Re-query CCDS DB by CCDS ID:80864.1Re-query CCDS DB by GeneID:11733See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80864.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121075.7 ENSMUSP00000112966.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121075.7Link to Ensembl Protein Viewer:ENSMUSP00000112966.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121075Re-query CCDS DB by Protein ID:ENSMUSP00000112966
Original member Current member NCBI NM_001310437.1 NP_001297366.1 Accepted alive Link to Nucleotide Sequence:NM_001310437.1Link to Protein Sequence:NP_001297366.1Re-query CCDS DB by Nucleotide ID:NM_001310437Re-query CCDS DB by Protein ID:NP_001297366Link to BLAST:NP_001297366.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297366.1 155 Q02357-7 155 100% 0 0

Chromosomal Locations for CCDS 80864.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 23139277 23139495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23140145 23140228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23141164 23141229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 23141596 23141694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGTGGACCTTCATCACGCAGCTCCTGGTCACGCTGGTGCTGTTAGGCTTCTTCCTGGTCAGCTGTCAGA
ATGTGATGCATATTGTCAAGGGTTCCCTGTGCTTTGTGCTGAAGCACATCCACCAGGAACTGGACAAGGA
GCTGGGGGAGAGCGAGGGCCTGAGCGATGACGAGGAGACCATCTCTACCAGGGTGGTCCGCCGACGGGTC
TTCCTGAAGGGGGATGAGCTTCAGAATATTCCAGGAGAGCAGGTGACGGAGGAACAATTCACAGATGAAC
AGGGCAACATTGTTACCAAGAAGATCATTCGCAAAGTCGTCCGGCAGGTAGACTCGTCTGGTGCCATCGA
CACCCAGCAGCACGAGGAGGTGGAGCTAAGAGGGAGTGGACTCCAGCCGGACCTGATAGAGGGCAGGAAG
GGGGCTCAGATAGTGAAGCGGGCCAGCCTGAAAAGGGGCAAGCAGTGA

Translation (155 aa):
MWTFITQLLVTLVLLGFFLVSCQNVMHIVKGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRV
FLKGDELQNIPGEQVTEEQFTDEQGNIVTKKIIRKVVRQVDSSGAIDTQQHEEVELRGSGLQPDLIEGRK
GAQIVKRASLKRGKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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