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Report for CCDS20645.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20645.1 Public Mus musculus 6 Hebp1 23 108 98 CCDS HistoryNCBI Gene:15199Re-query CCDS DB by CCDS ID:20645.1Re-query CCDS DB by GeneID:15199See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20645.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045855.8 ENSMUSP00000042232.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045855.8Link to Ensembl Protein Viewer:ENSMUSP00000042232.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000045855Re-query CCDS DB by Protein ID:ENSMUSP00000042232
Original member Current member NCBI NM_013546.3 NP_038574.3 Accepted alive Link to Nucleotide Sequence:NM_013546.3Link to Protein Sequence:NP_038574.3Re-query CCDS DB by Nucleotide ID:NM_013546Re-query CCDS DB by Protein ID:NP_038574Link to BLAST:NP_038574.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038574.3 190 Q9R257 190 99.4737% 0 1

Chromosomal Locations for CCDS 20645.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 135137889 135138063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 135152821 135153001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 135155151 135155289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 135168020 135168097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGTTGGGCATGATCAGGAACTCACTGTTCGGGAGCGTGGAAACGTGGCCTTGGCAGGTTCTAAGCACCG
GGGGCAAGGAAGATGTCTCCTATGAGGAAAGAGCCTGTGAAGGGGGCAAGTTTGCTACTGTGGAAGTGAC
AGACAAGCCAGTGGATGAGGCTCTCCGGGAAGCGATGCCCAAGATCATGAAGTATGTGGGTGGCACCAAT
GACAAAGGAGTCGGCATGGGTATGACAGTCCCTGTCTCTTTTGCCGTGTTTCCCAATGAAGATGGCTCCC
TACAGAAGAAACTGAAAGTCTGGTTCCGGATTCCGAACCAATTTCAAGGCAGCCCACCGGCCCCCAGTGA
TGAGAGTGTGAAGATCGAGGAACGGGAGGGCATCACTGTCTATTCCACGCAATTTGGAGGCTATGCCAAG
GAAGCAGACTATGTTGCTCATGCCACCCAGCTACGGACCACACTGGAGGGCACACCAGCGACCTACCAGG
GTGATGTCTATTACTGTGCCGGATATGACCCTCCCATGAAGCCCTATGGACGCCGTAACGAGGTCTGGCT
TGTGAAGGCATGA

Translation (190 aa):
MLGMIRNSLFGSVETWPWQVLSTGGKEDVSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTN
DKGVGMGMTVPVSFAVFPNEDGSLQKKLKVWFRIPNQFQGSPPAPSDESVKIEEREGITVYSTQFGGYAK
EADYVAHATQLRTTLEGTPATYQGDVYYCAGYDPPMKPYGRRNEVWLVKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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