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Report for CCDS23400.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23400.1 Public Mus musculus 9 Morf4l1 23 108 98 CCDS HistoryNCBI Gene:21761Re-query CCDS DB by CCDS ID:23400.1Re-query CCDS DB by GeneID:21761See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23400.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085248.11 ENSMUSP00000082346.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085248.11Link to Ensembl Protein Viewer:ENSMUSP00000082346.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000085248Re-query CCDS DB by Protein ID:ENSMUSP00000082346
Original member Current member NCBI NM_001039147.2 NP_001034236.1 Accepted alive Link to Nucleotide Sequence:NM_001039147.2Link to Protein Sequence:NP_001034236.1Re-query CCDS DB by Nucleotide ID:NM_001039147Re-query CCDS DB by Protein ID:NP_001034236Link to BLAST:NP_001034236.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034236.1 362 P60762-1 362 100% 0 0

Chromosomal Locations for CCDS 23400.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 90092318 90092402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90093734 90093818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90094355 90094527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90095121 90095209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90096503 90096604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90097372 90097460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90097864 90097889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90100443 90100523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90102300 90102386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90103655 90103771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90107235 90107302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90110126 90110172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 90114536 90114575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGCGCCCAAGCAGGACCCTAAGCCGAAATTCCAGGAGGGCGAGCGAGTGCTGTGCTTTCATGGGCCTC
TTCTCTATGAAGCAAAGTGTGTAAAGGTTGCCATAAAGGACAAACAAGTGAAATACTTCATCCATTACAG
TGGCTGGAATAAAAAAAGTGCTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACGTGAGGATATT
GTAGCCCTTTTTCCTGTTCCTGAAGGAGCTCCCTCAGTACACCACCCCCTCCTGACCTCTAGTTGGGATG
AATGGGTGCCAGAAAGCAGAGTACTCAAATACGTGGACACCAATTTGCAGAAACAGCGAGAACTTCAAAA
GGCCAATCAGGAACAATATGCAGAGGGCAAGATGAGAGGGGCTGCTCCGGGGAAGAAGACATCCGGCCTG
CAACAGAAAAATGTCGAAGTGAAAACAAAAAAGAACAAGCAGAAAACACCTGGAAATGGAGATGGTGGCA
GTACCAGTGAGACACCTCAGCCTCCTAGGAAGAAGAGAGCCCGGGTAGATCCTACCGTTGAAAATGAAGA
AACCTTCATGAACAGAGTTGAAGTTAAAGTGAAGATCCCTGAAGAGCTGAAACCCTGGCTTGTGGATGAC
TGGGACTTGATCACCAGACAGAAGCAGCTTTTTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTTTGG
AGGATTATGCAAATTATAAGAAGTCTCGAGGAAATACAGATAATAAAGAGTATGCTGTTAATGAGGTGGT
GGCAGGCATAAAGGAGTACTTCAATGTCATGTTGGGCACTCAGCTCCTCTACAAGTTTGAGAGACCACAG
TACGCTGAAATCCTCGCCGACCACCCGGATGCGCCCATGTCCCAGGTGTACGGAGCGCCACATTTGCTGA
GATTATTTGTGCGAATTGGAGCGATGTTGGCCTACACGCCTCTAGATGAGAAAAGCCTTGCTTTATTACT
GAACTATCTACATGATTTTCTCAAGTACCTGGCGAAGAATTCTGCAACCTTGTTCAGTGCCAGTGATTAT
GAAGTGGCCCCTCCTGAGTACCACCGGAAAGCCGTGTGA

Translation (362 aa):
MAPKQDPKPKFQEGERVLCFHGPLLYEAKCVKVAIKDKQVKYFIHYSGWNKKSAVRPRRSEKSLKTREDI
VALFPVPEGAPSVHHPLLTSSWDEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGKMRGAAPGKKTSGL
QQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKVKIPEELKPWLVDD
WDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFERPQ
YAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYLAKNSATLFSASDY
EVAPPEYHRKAV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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