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Report for CCDS12661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12661.1 Public Homo sapiens 19 POLR1G 24 110 108 CCDS HistoryNCBI Gene:10849Re-query CCDS DB by CCDS ID:12661.1Re-query CCDS DB by GeneID:10849See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309424.8 ENSP00000310966.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309424.8Link to Ensembl Protein Viewer:ENSP00000310966.3Re-query CCDS DB by Nucleotide ID:ENST00000309424Re-query CCDS DB by Protein ID:ENSP00000310966
Original member Current member NCBI NM_012099.3 NP_036231.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012099.3Link to Protein Sequence:NP_036231.1Re-query CCDS DB by Nucleotide ID:NM_012099Re-query CCDS DB by Protein ID:NP_036231Link to BLAST:NP_036231.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036231.1 510 O15446-1 510 100% 0 0

Chromosomal Locations for CCDS 12661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45406697 45406718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45407094 45407235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45408133 45409501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1533 nt):
ATGGAGGAGCCCCAGGCCGGCGATGCTGCTCGGTTCTCTTGTCCCCCCAACTTTACCGCGAAGCCCCCAG
CCTCAGAGTCCCCTCGTTTCTCCTTGGAGGCGCTGACGGGTCCAGATACGGAGCTGTGGCTTATTCAGGC
CCCTGCAGACTTTGCCCCAGAATGCTTCAATGGGCGGCATGTGCCTCTCTCTGGCTCCCAGATCGTCAAG
GGCAAATTGGCAGGCAAGCGGCACCGCTATCGAGTCCTCAGCAGCTGTCCCCAAGCTGGAGAAGCGACCC
TGCTGGCCCCCTCAACGGAGGCAGGAGGTGGACTCACCTGTGCCTCAGCCCCCCAGGGCACCCTAAGGAT
CCTTGAGGGTCCCCAGCAATCCCTGTCAGGGAGCCCTCTGCAGCCCATCCCAGCAAGTCCCCCACCACAG
ATCCCTCCTGGCCTGAGGCCTCGGTTCTGTGCCTTTGGGGGCAACCCACCAGTCACAGGGCCTAGGTCAG
CCTTGGCCCCCAACCTGCTCACCTCAGGGAAGAAGAAAAAGGAGATGCAGGTGACAGAGGCCCCAGTCAC
TCAGGAGGCAGTGAATGGGCACGGGGCCCTGGAGGTGGACATGGCTTTGGGGTCGCCAGAAATGGATGTG
CGGAAGAAGAAGAAGAAAAAAAATCAGCAGCTGAAAGAACCAGAGGCAGCAGGGCCTGTGGGGACAGAGC
CCACAGTGGAGACACTGGAGCCTCTGGGAGTGCTGTTCCCGTCCACCACCAAGAAGAGGAAGAAGCCCAA
AGGGAAAGAAACCTTCGAGCCAGAAGACAAGACAGTGAAGCAGGAACAGATTAACACTGAGCCTCTAGAA
GACACAGTCCTGTCCCCGACCAAAAAGAGAAAGAGGCAAAAGGGGACGGAAGGGATGGAGCCAGAGGAGG
GGGTGACAGTTGAGTCTCAGCCACAGGTGAAGGTGGAGCCACTGGAGGAAGCCATCCCTCTGCCCCCTAC
GAAGAAGAGGAAAAAAGAAAAGGGACAGATGGCAATGATGGAGCCAGGGACGGAGGCGATGGAGCCAGTG
GAGCCGGAGATGAAGCCTCTGGAGTCCCCAGGGGGGACCATGGCGCCTCAACAGCCAGAAGGAGCGAAGC
CTCAGGCCCAGGCAGCTCTGGCAGCTCCCAAAAAGAAGACGAAGAAAGAAAAACAGCAAGATGCCACAGT
GGAGCCAGAGACAGAGGTGGTGGGGCCTGAGCTGCCGGATGACCTTGAGCCTCAGGCAGCTCCCACATCC
ACCAAGAAGAAGAAGAAGAAGAAAGAGAGAGGTCACACAGTGACTGAGCCAATTCAGCCACTAGAGCCTG
AACTGCCAGGGGAGGGACAGCCTGAAGCCAGGGCAACTCCGGGATCCACCAAGAAGAGGAAGAAGCAGAG
TCAGGAAAGCCGGATGCCAGAGACAGTGCCCCAAGAGGAGATGCCAGGGCCGCCACTGAATTCAGAGTCT
GGGGAGGAGGCTCCCACAGGCCGGGACAAGAAGCGGAAGCAGCAGCAGCAGCAGCCTGTGTAG

Translation (510 aa):
MEEPQAGDAARFSCPPNFTAKPPASESPRFSLEALTGPDTELWLIQAPADFAPECFNGRHVPLSGSQIVK
GKLAGKRHRYRVLSSCPQAGEATLLAPSTEAGGGLTCASAPQGTLRILEGPQQSLSGSPLQPIPASPPPQ
IPPGLRPRFCAFGGNPPVTGPRSALAPNLLTSGKKKKEMQVTEAPVTQEAVNGHGALEVDMALGSPEMDV
RKKKKKKNQQLKEPEAAGPVGTEPTVETLEPLGVLFPSTTKKRKKPKGKETFEPEDKTVKQEQINTEPLE
DTVLSPTKKRKRQKGTEGMEPEEGVTVESQPQVKVEPLEEAIPLPPTKKRKKEKGQMAMMEPGTEAMEPV
EPEMKPLESPGGTMAPQQPEGAKPQAQAALAAPKKKTKKEKQQDATVEPETEVVGPELPDDLEPQAAPTS
TKKKKKKKERGHTVTEPIQPLEPELPGEGQPEARATPGSTKKRKKQSQESRMPETVPQEEMPGPPLNSES
GEEAPTGRDKKRKQQQQQPV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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