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Report for CCDS49303.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49303.1 Public Mus musculus 13 Zfp65 23 108 98 CCDS HistoryNCBI Gene:235907Re-query CCDS DB by CCDS ID:49303.1Re-query CCDS DB by GeneID:235907See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49303.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073157.14 ENSMUSP00000072900.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073157.14Link to Ensembl Protein Viewer:ENSMUSP00000072900.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000073157Re-query CCDS DB by Protein ID:ENSMUSP00000072900
Original member NCBI NM_145622.2 NP_663597.1 Updated not alive Link to Nucleotide Sequence:NM_145622.2Link to Protein Sequence:NP_663597.1Re-query CCDS DB by Nucleotide ID:NM_145622Re-query CCDS DB by Protein ID:NP_663597
Current member NCBI NM_145622.3 NP_663597.1 Accepted alive Link to Nucleotide Sequence:NM_145622.3Link to Protein Sequence:NP_663597.1Re-query CCDS DB by Nucleotide ID:NM_145622Re-query CCDS DB by Protein ID:NP_663597Link to BLAST:NP_663597.1

Chromosomal Locations for CCDS 49303.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67707986 67708929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67710315 67710410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67710881 67711007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67729061 67729066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGGAGGAAATGCTGTCATTCAGGGATGTGGCCATTGATTTCTCTGAAGAGGAGTGGGAATGCCTAGGTC
CTGCTCAGTGGAATTTGTACAGGGATGTGATGCTGGAGAATTACAGCCACCTTGTGTTCCTGGGTCTTGC
TTTGTCTAAGCCATATCTGGTCACATGTCTGGAGAAAATACAAGAGACTTCAGGTGTGAAAAGAGGAGGA
GCTCCATTTATGCTCCCAGGAGGAAAATGCTATACGTGCACAGAGTGTGGCAAAATCTTTGAGTGGAAAA
AAGTGTTTCAAAATCACCAGATGCTTGATTTACGAATGAATCCCTACAAGTGTGAAGAATGTGCCAAGTC
TTTCCATAGTCCATCATTAAGTTCTAAAGAGAGCAGAATTCATACAGGAGGGAAACCTTACAAATGTGAA
GTTTGTGGCAAGGCCTTCTGCATTCCATTATTACTTTCTAAACACAAGATAATTCATACAGTAGAGAAAC
CCTACAAGTGTGATATATGTGGCAAGGCCTTCCAATATCCATCAAAACTTTCCAGACATAAACAGATTCA
TTCAGAAGAGAAACCATACAAGTGTGAAGTATGTGGAATGGCCTTCCACTTTCCATCATTACTTTTGGTA
CACAAGCGAATTCATACAGGAGAGAAGCCATACAAGTGTGAAGAATGTGGCAAGGCCTTCCGCAATTCAT
CATTTCTTTCTAAACACAAAATAATTCATAGAGGAGAAAAACCCTACAAGTGTGAGGTATGTGGCAAGGA
CTTCCATTATCCATCAAGACTTTACAACCATAAGAAAATCCATTCAGGAGAGAAACCATACAAGTGTGAA
TTATGTGGGAAGGCCTTCTGTTTTCCTTCATCACTATCTAAACACAAGAGAATTCACACAGGAGAGAAAC
CATACAAATGTAAAGAGTGTGAAAAGCCCTTCTGCTATCTGTCCTCACTTTCTAAACACAAGATCATTCA
TACAGGAGAGAAACCCTACAAGTGTGACTTATGTGGCAAGGCCTTCCGTTATCCATCATTACTTTCTGAA
CACAAGGTAATTCATACAGGAAATAAACCCTACAAGTGTGAAGTATGTGGCAAAGCCTTCCATTTTTCCT
CACAACTTAAAAAGCATAAGAAAATTCATGGGGCTGGAGACATGGCTCAGTAG

Translation (390 aa):
MEEMLSFRDVAIDFSEEEWECLGPAQWNLYRDVMLENYSHLVFLGLALSKPYLVTCLEKIQETSGVKRGG
APFMLPGGKCYTCTECGKIFEWKKVFQNHQMLDLRMNPYKCEECAKSFHSPSLSSKESRIHTGGKPYKCE
VCGKAFCIPLLLSKHKIIHTVEKPYKCDICGKAFQYPSKLSRHKQIHSEEKPYKCEVCGMAFHFPSLLLV
HKRIHTGEKPYKCEECGKAFRNSSFLSKHKIIHRGEKPYKCEVCGKDFHYPSRLYNHKKIHSGEKPYKCE
LCGKAFCFPSSLSKHKRIHTGEKPYKCKECEKPFCYLSSLSKHKIIHTGEKPYKCDLCGKAFRYPSLLSE
HKVIHTGNKPYKCEVCGKAFHFSSQLKKHKKIHGAGDMAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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