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Report for CCDS37361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37361.1 Public Mus musculus 16 Abi3bp 23 108 98 CCDS HistoryNCBI Gene:320712Re-query CCDS DB by CCDS ID:37361.1Re-query CCDS DB by GeneID:320712See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37361.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096012.10 ENSMUSP00000093711.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096012.10Link to Ensembl Protein Viewer:ENSMUSP00000093711.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000096012Re-query CCDS DB by Protein ID:ENSMUSP00000093711
Original member NCBI NM_178790.4 NP_848905.2 Updated not alive Link to Nucleotide Sequence:NM_178790.4Link to Protein Sequence:NP_848905.2Re-query CCDS DB by Nucleotide ID:NM_178790Re-query CCDS DB by Protein ID:NP_848905
Current member NCBI NM_178790.5 NP_848905.2 Accepted alive Link to Nucleotide Sequence:NM_178790.5Link to Protein Sequence:NP_848905.2Re-query CCDS DB by Nucleotide ID:NM_178790Re-query CCDS DB by Protein ID:NP_848905Link to BLAST:NP_848905.2

Chromosomal Locations for CCDS 37361.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 56477914 56477992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56532789 56532968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56556879 56556947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56562357 56562489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56574392 56574573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56575099 56575154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56586929 56586971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56587946 56588017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56588650 56588742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56592604 56592681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56594462 56594536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56595240 56595314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56596234 56596305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56596762 56596836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56602769 56602831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56604035 56604109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56604625 56604699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56606119 56606193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56642489 56642560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56647025 56647099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56652137 56652217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56654002 56654079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56657266 56657331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56660164 56660238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56666629 56666703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56668274 56668393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56671239 56671367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56671908 56671976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56675027 56675236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56677725 56677833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56685701 56685780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56686442 56686471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56686960 56687121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56688064 56688186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56688934 56689049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3240 nt):
ATGCTCTCCAGCCTGGGGTGTCTACTTCTCTGTGGAAGTATTGCACTTGCTCTGGGAAATGCACAGAAAT
TGCCAAAAGGTAAAAAGCCAAGCTTGAAAGTGCACATCAATACCACCAGCGACTCCATCCTCTTGAAGTT
CCTGCGTCCAAATGCAAACGTAAAGCTGGAAGGTTTTCTCCTGGGATATGGCAGCAATGTGTCTCCAAAC
CAGTACTTCCCTCTTCCCACAGAAGGGAAATTCACAGAGGCTGTAGTTGATGCAGAGCCGAAGTATCTGA
TAGTCGTACGACCTGCTCCTCCTCCCAGCCAGAAGAAGTCATGTTCAGGGAAATCTCGCCCTCGCAAACC
CCTCCAGCTGGTGGTGGGTACGTTGACACCGAGTTCTGTCTTCCTGTCCTGGGGATTCCTCATCAACCCA
CACCATGACTGGACATTGCCAAGCCACTGTCCCAGTGACAGATTTTATACAATTCGATATAGAGAAAAAG
ATAAAGAAAAGAAATGGATTTTTCAACTCTGCCCAGCTACTGAAACAATTGTGGAAAATCTAAAGCCCAA
CACAGTTTATGAATTTGGTGTGAAAGACAATATAGAAGGTGGAATTTGGAGTAAGATTTTCAATCATAAG
ACTATTGTTGGAAGTAAAAACAAAGTAAACGGGAAAATCCAAAGCACTTATGACCAGGTCCACTCAGTGC
CAGTCCCGAGGAAGCTAATCCCACTAACGATCATTAAGCAAGTGATTCAGAATGTTACTCACAGGGCTTC
AACCAAATCCCCAGACAAGACTCCTTTTGGGGGAACAATATTAGTTCATCTGATTATTCCGGGTCTTAAT
GAATCCACTGTAAAACTTCCCACATCCATAATGCTTGAGATTTCCGATGCTCTCAAGGCACAATTAGCTA
AGAATGAAACATTGGCTTTACCAGCAGAATCTAAAACACCAGAGGTCGAAAAATTGGCAGGGCAGCCAGT
AACAGTGACTCCGGAATCAGTTTCAAGAAGCACTAAGCCCACCCTGTCTAGTGCTTTAGACACTGCAGAG
ACAGCACTGGTCCTCAGTGAGAAGACGTCAGAAACAGCCCGCTCTGTTCTAATACCTGAGTTTGAATTGC
CCTTGAGCACTTTAGCTCCAAAAAGGTTCCCAGAGTTTCCTGAGGCAAAAACAGCCTTCCCATTGGAGAA
ACCTAGGGGTTCCTGGGCTTCAAGTGAGGAGCCATGGGTGGTACCTGGAGCTAAAACATCTGAAGATTCC
AGAGTCGTACAGCCTCAAACTGCAACTTATGATGTTATCTCAAGCTCAACAACTTCTGATGAGACTGAAA
TAGAGATTCACACAGCAACAAGAGATCCTATTCTGGACTCTGTCCCACCTAAAACTTCTAGAACTGCTGA
ACAGCCAAGGGCAACACTGGCTCCAATCGAAGCGTTATTTGAATCCCGAAATGTGGAAATCTTCACCAGT
CCTGAAGTGCGACCTACAACGGCTGCTCCTCAGCAAACTACATCTATCCCTTCCACACCCAAACGACAAT
CAACACCCAAACCGCCAAGAGTCAAGCCTGCACCCAGGCAGACAACCAGCATGCCTCCCAAGCTCAAAAC
ACCACACTCAAGGATGCCAGCAAAAGAGCCAGTTCCTAAGGAACCCCTGCATACGACTTCAAAGCCAAAA
ATGCCACCAAGTCCTGAAGTGGCAGACACTACATCTGCACCTTTAGAGACACGGGGCATTCCTCTCATAC
CTGTGATTTCACCAAGACCTAGTCAAGAGGAACTACAAACCGCCATGGAAGAAACAGACCAGTCTACCCA
AGAGCTCTTCACGACTAAGATTCCACGAACAACTGAATTGGCAAAGACAACTCAGGCACCACACAGATTG
CATACAGCTCCTGTGAGGCCCAGAATACCTGGCAGGCCACATGGCAGGCCTGCTCTGAACAAAACAACTA
CAAGGCCTGATAAAACCAAACCCAGAGGGACGTCCCATAAAAACGGAGTAGGAACAGGAACCAAGCAAGC
ACCTAAGCCACCAAGTCCTGGGAGAAATGCGTCAGTGGATTCACATGCCACAAGAAAACCAGGCTCAGTC
TCAGGGACGCGTCGTCCACCCATACCACATAGGCATTCGTCCACTAGACCTGTGTCTCCAGAGAGAAGGC
CTTTACCCCCGAATAATGTCACCGGGAAGCCAGGACGTGCGGGAATTGTTTCCTCCAGCCGGGTAACGTC
CCCACCCCTGAAGGCAACACTCCACCCTATCGGAACAGCCACAGCGAGACCAGGGGCAGAACAAAAGGAA
CCAACTGCTCCTGCTTCAGAAGAAGAGTTTGGTACTACAACTGACTTCAGTTCAAGTCCCACCAAAGAAA
CTGATCCCCTTGGGAAGCCCAGGTTCATAGGTCCCCATGTGCGATATATCCCAAAGCCTGAAAACAAGCC
CTGTTCCATCACTGACTCAGTCAGACGGTTCCCTACAGAGGAAGCCACGGAGGGGAATGCCACCAGCCCA
CCACAGAACCCACCCACCAACCTCACTGTGGTCACTGTCGAAGGCTGCCCCTCATTTGTCATCTTGGACT
GGGAAAAACCTCTAAATGACACTGTCACTGAATATGAAGTCATATCCAGAGAAAATGGGTCATTCAGTGG
GAAGAACAAGTCCATTCAAATTACCAATCAAACGTTCTCTACAGTAGAAAACCTGAAACCAGATACAAGC
TATGAATTCCAGGTGAAACCCAAAAATCCACTTGGTGAGGGCCCCGCCAGCAACACGGTAGCGTTCAGTA
CTGAATCAGCTGACCCAAGAGTGAGTGAGCCAATTTCTGCAGGAAGAGATGCCATCTGGACTGAAAGACC
TTTTAACTCAGACTCTTACTCAGAATGCAAAGGCAAACAGTATGTTAAAAGGACGTGGTATAAAAAATTT
GTCGGAGTGCAGCTATGTAACTCTCTCAGATACAAGATTTATTTGAGCGATTCCCTCACAGGCAAGTTTT
ACAACATAGGAGATCAGAGGGGCCACGGAGAAGATCACTGCCAGTTTGTGGATTCATTTTTAGATGGTCG
CACAGGACAGCAACTCACCTCTGAACAGTTACCCACCAAAGAAGGCTATTTCAGAGCTGTTCGTCAGGAA
CCTGTCCAATTTGGAGAAATAGGTGGTCATACCCAAATCAATTATGTCCAGTGGTATGAATGTGGGACCA
CAATACCTGGAAAATGGTAG

Translation (1079 aa):
MLSSLGCLLLCGSIALALGNAQKLPKGKKPSLKVHINTTSDSILLKFLRPNANVKLEGFLLGYGSNVSPN
QYFPLPTEGKFTEAVVDAEPKYLIVVRPAPPPSQKKSCSGKSRPRKPLQLVVGTLTPSSVFLSWGFLINP
HHDWTLPSHCPSDRFYTIRYREKDKEKKWIFQLCPATETIVENLKPNTVYEFGVKDNIEGGIWSKIFNHK
TIVGSKNKVNGKIQSTYDQVHSVPVPRKLIPLTIIKQVIQNVTHRASTKSPDKTPFGGTILVHLIIPGLN
ESTVKLPTSIMLEISDALKAQLAKNETLALPAESKTPEVEKLAGQPVTVTPESVSRSTKPTLSSALDTAE
TALVLSEKTSETARSVLIPEFELPLSTLAPKRFPEFPEAKTAFPLEKPRGSWASSEEPWVVPGAKTSEDS
RVVQPQTATYDVISSSTTSDETEIEIHTATRDPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTS
PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPRQTTSMPPKLKTPHSRMPAKEPVPKEPLHTTSKPK
MPPSPEVADTTSAPLETRGIPLIPVISPRPSQEELQTAMEETDQSTQELFTTKIPRTTELAKTTQAPHRL
HTAPVRPRIPGRPHGRPALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSV
SGTRRPPIPHRHSSTRPVSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKE
PTAPASEEEFGTTTDFSSSPTKETDPLGKPRFIGPHVRYIPKPENKPCSITDSVRRFPTEEATEGNATSP
PQNPPTNLTVVTVEGCPSFVILDWEKPLNDTVTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTS
YEFQVKPKNPLGEGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKF
VGVQLCNSLRYKIYLSDSLTGKFYNIGDQRGHGEDHCQFVDSFLDGRTGQQLTSEQLPTKEGYFRAVRQE
PVQFGEIGGHTQINYVQWYECGTTIPGKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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