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Report for CCDS19359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19359.1 Public Mus musculus 5 Tmem165 23 108 98 CCDS HistoryNCBI Gene:21982Re-query CCDS DB by CCDS ID:19359.1Re-query CCDS DB by GeneID:21982See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19359.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031144.13 ENSMUSP00000031144.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031144.13Link to Ensembl Protein Viewer:ENSMUSP00000031144.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000031144Re-query CCDS DB by Protein ID:ENSMUSP00000031144
Original member Current member NCBI NM_011626.2 NP_035756.2 Accepted alive Link to Nucleotide Sequence:NM_011626.2Link to Protein Sequence:NP_035756.2Re-query CCDS DB by Nucleotide ID:NM_011626Re-query CCDS DB by Protein ID:NP_035756Link to BLAST:NP_035756.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035756.2 323 P52875 323 100% 0 0

Chromosomal Locations for CCDS 19359.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 76184146 76184352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76199345 76199570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76204107 76204282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76204637 76204816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76207802 76207907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 76208510 76208586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGGCGGCCGCGGCCCGGGGGAGCGGCCGGGCGCCGACGCGAAGGCTGCTCGTGCTCTTGCTGCTTCAGT
TG
CTCTGGGCCCCGGCCGGGGTCCGCGCCGGCCCGGAGGAAGACCTGAGCCATCGGAACCAGGAGCCGCC
G
GCGCCCGCCCAGCAGCTGCAGCCGCAGCCCGCGGCGGTGCAGGGCCTCGAGCCGGCCCGGGCCGAGAAA
GGA
TTGACACCAGTCGCCCCAGTTCATACCAACAAAGAAGATGCAGCTGCCCAGACGAATCTGGGATTTA
TC
CATGCGTTTGTGGCTGCCATATCAGTCATCATAGTGTCCGAACTCGGCGACAAGACGTTTTTCATAGC
T
GCCATCATGGCGATGCGCTATAACCGGCTGACTGTGCTGGCCGGGGCCATGCTGGCCTTGGCCTTGATG
ACA
TGCTTGTCGGTTTTGTTTGGCTATGCCACAACAGTCATCCCCAGGGTGTATACATACTATGTTTCAA
CT
GCACTCTTCGCCATTTTTGGCATTAGAATGCTTCGGGAAGGTTTGAAGATGAGCCCAGATGAGGGTCA
G
GAGGAGCTAGAAGAAGTCCAAGCAGAGTTAAAGAAGAAGGATGAAGAATTCCAACGAACCAAACTCTTA
AAT
GGGCCAGATGTTGAAACTGGTACAAGCACAGCAATACCTCAGAAAAAGTGGTTACATTTTATTTCAC
CC
ATTTTTGTTCAAGCGCTCACATTAACGTTCTTGGCAGAATGGGGCGATCGCTCTCAACTCACTACCAT
T
GTCCTGGCAGCTAGAGAGGACCCTTATGGTGTAGCAGTGGGTGGCACAGTGGGACACTGCTTATGTACT
GGA
TTGGCAGTAATTGGAGGAAGGATGATAGCGCAAAAGATCTCTGTCCGAACTGTGACAATCATCGGAG
GC
ATCGTATTTTTGGCGTTTGCATTTTCTGCCCTGTTTATAAGTCCAGAGTCTGGTTTTTAA


Translation (323 aa):
MAAAARGSGRAPTRRLLVLLLLQLLWAPAGVRAGPEEDLSHRNQEPPAPAQQLQPQPAAVQGLEPARAEK
G
LTPVAPVHTNKEDAAAQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALM
T
CLS
VLFGYATTVIPRVYTYYVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQRTKLL
N
GPDVETGTSTAIPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARE
DPYGVAVGGTVGHCLCT
G
LAVIGGRMIAQKISVRT
VTIIGGIVFLAFAFSALFISPESGF



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser