1XBR,2X6U,1H6F


Conserved Protein Domain Family
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smart00425: TBOX 
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Domain first found in the mice T locus (Brachyury) protein
Statistics
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PSSM-Id: 214656
Aligned: 39 rows
Threshold Bit Score: 156.659
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XBR_A      2 LKVSLEE-RDLWTRFKELTNEMIVTK-N-GRRMFPVLKVSMSGLDPNAMYTVLLDFVAADNHR--WKYVN----G--EWV 70  African clawed frog
NP_498313  56 PNVELVN-RNLWSTFLECGTEMIITK-K-GRRMFPLVKLKLSGLDKNSNYTIIMEMISVDKLR--YKFWN----G--NWI 124 nematode
S41015    144 VTLREDQ-DKLWNLFHYHKNEMIVTK-S-GRKMFPKLEYVVRGLTPNKLYAMMLHIEPSDDHR--YKFSS----G--EWV 212 nematode
NP_499286   6 VSIEGSQ-ETLWKIFHAEVNEMIVTK-N-GRKLFPKLEYIVEGLDENKLYAIMLQLQPVGESR--FKFSG----G--KWQ 74  nematode
NP_498317   7 VTLSSTT-DPLWRSCHEYDNEMVITV-N-GRRIFPTLEYTVTGLDTFKLYSMCMHLDLVDDKK--LRFTG----G--QWA 75  nematode
NP_499526  10 IKVSLST-PEIWEEFYPK-TEMIVTR-NrGRVIFPHLDYIIKGLDPGSLYSIYIHLERVDGIK--YKFDA----G--EWK 78  nematode
NP_494611 167 VKISLAN-QEQWAKFHEIGTEMMVFN-S-GRRLFPLLAYKVSGLDPHKLYCAGVHMIPDSAYKqeYDHDL----Q--QWV 237 nematode
NP_502266  25 IEISEIT-KKQWNQLIGI-HEVVVYK-D-CRKLFPAAKFSVRGLDPALLYSVEICFDVLSPFT--FSYNK----KleKWI 94  nematode
NP_508304  15 IQVNVIG-SS--RTSDDHFLEQMLTKrK-KTNISQDLHYTLLGLNPRDLYQISIKLARIDEKK--YKFNGnfngG--DYY 86  nematode
NP_499506 117 VTVTLQDpQDLWKELHYLSNEQNVLN-N-GRKIFPALNYKVEHLNPESNYKVEILLRRMVPYQ--IQYSN----G--SWS 186 nematode
1XBR_A     71 PGGKPEPQAP-SCVYIHPDSPNFGAHWMKDPVSFSKVKLTN---KMNGGGq----------------------------- 117 African clawed frog
NP_498313 125 VAGVGEHHPL-PTCFVHPQSPRSGEWWMTDGVDFKMAKLSNnpfNNDGHi------------------------------ 173 nematode
S41015    213 KSGKAEKHRE-PKKLWHADGVRSGKEWMTNPVCFDRVKITNc--aESTNAsm---------------------------- 261 nematode
NP_499286  75 ETGKAEKQVD-AKKMWHADGVRKGSDWMWSSICFDRVKISNyseSNNASm------------------------------ 123 nematode
NP_498317  76 ESVSTEKKDP-PRKVWHHNGSQTGKDWMLRNVSFDQIRITNrksKEDGNAsy---------------------------- 126 nematode
NP_499526  79 EFAKGDPILP-IQYKEHPRGKRTGAEWMSEPVSFAHIKITNnpeIKDQKVi----------------------------- 128 nematode
NP_494611 238 NCLNQKKTIFkPTSEILGRIEN-GFKLMSLGIDMSDVKIFNiaiRKKTPLqieksrk----------------------- 293 nematode
NP_502266  95 PTKTPVNCQS-S--ALSSMICETGDWFMNGDMDFGALNITSsheKAKEKIeqnr-------------------------- 145 nematode
NP_508304  87 PHKNSEIPMEdTEEIVHLDGYQTGARWMKTGVYFPKIGISKeqpDKERCL------------------------------ 136 nematode
NP_499506 187 RKNVQSKKTIaMKTEKVFVGEFTGQDIMRTGLDLSDVKVFNigsDNKKKVtpyeemsdaekreydtqyskkktsmvgtak 266 nematode
1XBR_A    118 ---------------------------------iMLNSLHKYEPRIHIVRVGGTQRMIT-------------S------- 144 African clawed frog
NP_498313 174 ----------------------------------VLNSMHRYNPRFHIVRADSSGQPIL-------------Asl----- 201 nematode
S41015    262 ---------------------------------iFLHSMHKYTPVMSIYESPSESPFSV-------------Pqpstrlv 295 nematode
NP_499286 124 ---------------------------------iYLNSMHKYIPVLTIYESPSESPFCV-------------Pqssnqiv 157 nematode
NP_498317 127 ---------------------------------vHLLTQHRYIPVLTIYEGDQlv------------------------- 148 nematode
NP_499526 129 ----------------------------------LVQSMHKHIPVVTVKQVRHYKTGYQ-------------Edfs---g 158 nematode
NP_494611 294 ---------------------------pnldktiEVLIQYKYLPVIKIYELSNSGMEKK-------------Eia----- 328 nematode
NP_502266 146 -------------------------------iavCLSSRTMYQIRVVLYEMQNDELIYlk-------------------- 174 nematode
NP_508304 137 ----------------------------------LLESLHAYVPVLRFTTSSGISle----------------------- 159 nematode
NP_499506 267 mwagvilsrsliqsltrtlslglsqsqslsltlsLTLSLNLYLILNLSLEVSNECKYIPvliineilpnqelRlv----- 341 nematode
1XBR_A    145 --HSFPETQFIAVTAYQNEEITALKIKHNPFAKAFLDAKERN 184 African clawed frog
NP_498313 202 ktFSFKETEFIAVTAYQNDVVTKCKIDNNPFAKGFRNIDTVR 243 nematode
S41015    296 tsVRLTYTEFIAVTAYQNDAVIKLKIKFNPFAKGFREGSQSD 337 nematode
NP_499286 158 atAKFPHTEFIAVTAYQNQKITDLKIKHNSFAKGFRDGNLSR 199 nematode
NP_498317 149 htARIPHSQFISVTAYHKGELNTLKTNNNPYSTGSRKDRRRE 190 nematode
NP_499526 159 eqFRLEATEFMVVTAYQNEILKNLKVHHNKFASGFRSNGKRR 200 nematode
NP_494611 329 -qATFPETSFVTVSIYRNQKIKEMKTLGNKYCRTDRKQIVME 369 nematode
NP_502266 175 -eTKFDEMIFITCTEYRGQVNRELKKSMNRFSRKRKYEISGT 215 nematode
NP_508304 160 -vTVWSQKFVTTMTSSNRSVKRREKRKLEETTGPSAKKTPEV 200 nematode
NP_499506 342 geFENEITQFATVSSYKNHIVKALRTAANPTSRGDAKQEAVQ 383 nematode
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