Conserved Protein Domain Family
Dna2

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pfam08696: Dna2 (this model, PSSM-Id:285859 is obsolete and has been replaced by 462565)
DNA replication factor Dna2
Dna2 is a DNA replication factor with single-stranded DNA-dependent ATPase, ATP-dependent nuclease, ( 5'-flap endonuclease) and helicase activities. It is required for Okazaki fragment processing and is involved in DNA repair pathways.
Statistics
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PSSM-Id: 285859
Aligned: 147 rows
Threshold Bit Score: 125.321
Created: 14-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q86IV6        631 SESIGESREIQLLDEWIYTP-VRPGDIVNVigefdd-----ngeiiINN--IQN-LLILHPDILITGTELGGSLTCTRRS 701  Dictyostelium...
Q9U3F2        122 IDKEGTTRIVYLQDHWSEMS-IEAGSTINLigaqaw----gdrdflVND--DVG-IVILNPDALVPCTAVASATFCARKT 193  Caenorhabditi...
A0BNB9         97 fgdNQKTIEIFLFDHYNNLKqIRKGMQIRVngefid-----sraiiFTQkiQNKnSFTLEPETLVAPSILNGLDFCRRKQ 171  Paramecium te...
CAP23520      147 VDKQRKTRVIYLQDQWAELD-VEVGNAINLiapqvw----gnddyiVNN--QKG-IVILNPNALVSCTAVASATFCARKT 218  Caenorhabditi...
XP_003117319  129 VDKNGKTRLVYLQDRWSELD-IEVGNTINLigpekw----gdddyiAND--TKG-IVILNPNALVPCTAVASSLFCSRKV 200  Caenorhabditi...
XP_001606961  218 KDVHEVAATVKCSGTWRYTK-IQPGEAIIIkaiketp---eakhwtVNN--NSG-FIISQPDTLVSGTSVVGALFCNRRS 290  jewel wasp
XP_002429631  227 dvKSGQKGICRLRDVWTFSL-VSLHDVVVIqakls------ddgwiVNN--KTG-YIILNSDNFVSSTSLVSAMFCMRQG 296  human body louse
EFO21539       95 cEDTSKIYRVRLEGIWSSTP-VKIGSSLRVigaemk----geeellLNW--ENG-VLIVEHNVLVPCTLIVQGISCRRKA 166  eye worm
XP_003373552  162 VDSGGTAKRVWLEEYWSDGM-FKEGDKVRAflpknss---emdefhISN--KSG-AVILNPSSVVGVNRISNGHFCTRKS 234  Trichinella s...
XP_649299      37 EQQEKKQFILYLDDLWYETS-LKVGDFIHLifleertknslpnpfiLNN--RTPiLLIQNPDYLINTTSTVSSTWCNRQT 113  Entamoeba his...
Q86IV6        702 VLKEQI--RVGNs-----nSSTVPIFGSIVHEIFQECL------KN-N--R--------------FHL---DDINTFKQE 748  Dictyostelium...
Q9U3F2        194 VLNDKF--KFGNa------SNKAMLLGTIMHEIFQTAI------TS-------------------KKR---PVMENDLMK 237  Caenorhabditi...
A0BNB9        172 FTREFFqnQCFG-------TTLEMLSGKILHDFFQNIImdvksyDSlF--EnieqldehqkdlqqLVV---ENLPQSFLQ 239  Paramecium te...
CAP23520      219 ILNEKF--KFGNa------SNKAMLLGNIVHEIFQTAI------TN-K--K----------------R---PLVDSDLLK 262  Caenorhabditi...
XP_003117319  201 ILNDKF--KFGNa------SNKAMLLGTIIHEIFQTAI------TS-K--K----------------R---PLVEDNLLQ 244  Caenorhabditi...
XP_001606961  291 TLQEKF--RLIEslphnnvGNNYMLTGSLTHELFQTVL------DE-K--I--------------TDA---KKISALLDD 342  jewel wasp
XP_002429631  297 LFNYFY--KGMEp-----gSNQKMLIGRMIHEFFQKCL------KT-R--S--------------CTD---ENVKEMVSD 343  human body louse
EFO21539      167 ALSHYF--KGRSs------TTKEMFIGNVVHELFQTAV------TR-S--E--------------FDVsesSLLDLWRKE 215  eye worm
XP_003373552  235 VLMEIF--KGFDk------PGLKTQVGIIAHKMFQRAV------KE-S--I--------------SDE---DTLRKMILE 280  Trichinella s...
XP_649299     114 VIKNYL---FLDd------YYEATTLGTIIHGTIQHIL------IT-NppE--------------FNK---TIFKSMIEE 160  Entamoeba his...
Q86IV6        749 II--Gk--sTF--QLGLSSLGET-QDTALNHLENWLPTIDKFAKTFILPSSSSSSASSlkknliEinsekwHLSISKILE 821  Dictyostelium...
Q9U3F2        238 IW--NkqapKY--AEELVALSFT-PSCLDAELQPYFSIICGWINKHYPLSNSFFSKREpl---------psKSELLEVYD 303  Caenorhabditi...
A0BNB9        240 PI--SqlysKY--IQEFYHLEKKtVREMLINIIPKCVNTLRWIQQFVIKQQPISLKQQkss-------dvfKIKILKWVS 308  Paramecium te...
CAP23520      263 IW--TtqapKY--AEDLVALSFT-PTCLDAELQPYFSVICNWINKHYPTSTGLFTKRE------PlpsksqLL---EVHD 328  Caenorhabditi...
XP_003117319  245 IW--NtqapKY--AEELVALSFT-PSCLNVELKPYFSVICDWINKHYPLSNSFFTKRE------QlpskseLL---EVYD 310  Caenorhabditi...
XP_001606961  343 IL--K----SRnaIQMMYSAGIS-RQDCRNLMLPAVGQIHKFIQRYI------VGIEP------EtpdqnyNGKIEKICD 403  jewel wasp
XP_002429631  344 FLgsH----DY--LLDFYFSGMK-SEEIEREIESFAPSVRDFLDVYMKGKRKPVgk-------------nfAGGIEEILD 403  human body louse
EFO21539      216 LR--E----QY--SEQFFALNLS-FQEIEDELCLYFKTIIRWVSTHMPPPRGRNEPLQ------Ig------sKIIKVVD 274  eye worm
XP_003373552  281 IS--Kn--vEF--VQNQYYYDID-PVALNSELQSFVKAIAKFVQNFLSNRNPLPGVVP------St-------VIDRVLA 340  Trichinella s...
XP_649299     161 LS--E----EL--LTKVYVLGIT-RKEFIDHAMEFYDTVNNWYQCWKTKTIKTNLNRE--------------IHFSEFIA 217  Entamoeba his...
Q86IV6        822 IEENIWSLMYGLKGKIDSSLEI 843  Dictyostelium discoideum
Q9U3F2        304 IEENIWDSKLGLKGKIDVTMRT 325  Caenorhabditis elegans
A0BNB9        309 NEQLISSSVYGLKGFIDVVVQV 330  Paramecium tetraurelia
CAP23520      329 IEENIWDSKLGLKGKVDVTMRT 350  Caenorhabditis briggsae
XP_003117319  311 IEENIWDSKLGLKGKVDVTMRT 332  Caenorhabditis remanei
XP_001606961  404 IEENVWLPSLGLKGKIDLTIEI 425  jewel wasp
XP_002429631  404 IEELIKSPNLGLQGRIDVTVKI 425  human body louse
EFO21539      275 VEESIWNPCYGFKGKIDCTLKV 296  eye worm
XP_003373552  341 VEEEMISEKFGFRGSIDMTMGV 362  Trichinella spiralis
XP_649299     218 SEPQIQSQIFGFKGAIDillnd 239  Entamoeba histolytica HM-1:IMSS
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