Conserved Protein Domain Family
Tmemb_cc2

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pfam10267: Tmemb_cc2 (this model, PSSM-Id:313493 is obsolete and has been replaced by 463036)
Predicted transmembrane and coiled-coil 2 protein
This family of transmembrane coiled-coil containing proteins is conserved from worms to humans. Its function is unknown.
Statistics
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PSSM-Id: 313493
Aligned: 39 rows
Threshold Bit Score: 341.967
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q18025         24 KAKIVQKLIEIKDKLRALNEKREADVEKFLSITRQSeisrgvgaDNPQRARIRNNFERQNRKHAHETEMLQKKLIDYEER 103 Caenorhabditis...
21_pfamImport   4 QRHLQQKILRLVEQIRVEETERDQNLSEYLQMANNV--------EKRQAFRIKQTFEHRNQKSAAAIAQLQHRLEHYHHK 75 
9_pfamImport    4 QDSIKHRILYLSEQLKVEKSSRDENMVGYLKLVSKA--------DRHQAPLIRQAFEKVNQRSSATIGQIERKLQQNYRQ 75 
11_pfamImport   1 KAKIVQKLVEIKDKLRALNEKREADVEKFLTVTRQSeisrgigaDNPQRARIRNNFERQNRKHAQETETLQKKLIDYEER 80 
1_pfamImport    1 -TRIERKIEQIKERLSRISLAREADVDDFLSMTSSMeg----grENPQLARVRQHFEKKNKKSSQEIEHLKKKLEQLQSK 75 
26_pfamImport   4 MDHVRSKIVRTKDLIRSEQTARDDNVNEYLKLASNA--------DKQQLARIKSIFEKKNQKSAVGISQLQKKLEGYNKR 75 
16_pfamImport   4 IAHLNAKIERTKDLIRLEQTTRDENVNEYLKLAANA--------DKQQLARIKAVFEKKNQKSALCIVQLQKKLEGYNKR 75 
5_pfamImport    4 IEHIQSKISKTMDQIRAEQTTRDDNVNEFIKLATNA--------DKQQIQRIKSVFEKKNQKSAQIISQLQKKLETYNKR 75 
31_pfamImport   4 IDHIQQKIVRTKETIKSEQTQRDNNVNEYLKCAANA--------DKQQLQRIKSVFEKKNQKSAQTISQLQKKLENYNKR 75 
27_pfamImport   4 IEHYQRKLNKTMELIKAEQAAKEENVNEYLRLAASAs------eDKQQLARIKAVFEKKNQKSTQSISTLQKKLEGYSKR 77 
Q18025        104 ---LKLVDsg----eyEPSPTKsrvfptgiRKAKGmTE------------------------------------------ 134 Caenorhabditis...
21_pfamImport  76 vmeLKELElklranpeQESKG---------RSPR--LSnvtresslsmiqsmqsvapr---------------------k 123
9_pfamImport   76 ---LQELEla----vrPRSSTLna-----dASSPEtEQptervlstytgkwcvyqsapstpsitspqpiyfvneiresae 143
11_pfamImport  81 ---LRQVDng----eyEPSPSRsrvfptgiRKAKGvTD------------------------------------------ 111
1_pfamImport   76 ---LVDLNmgivsevsPKSSVLnn-----iRKTGPlLR------------------------------------------ 105
26_pfamImport  76 ---LKDLEt-------HGLTTShh-----lKQPKEmLRdvghglrhvgg------------------------------- 109
16_pfamImport  76 ---IKSWEq------hGTSGQSh-------RQPREvLRdmgqglknvgg------------------------------- 108
5_pfamImport   76 ---IRDIEs-------QKLHTSh-------RQPREvLRdmgqglknvgg------------------------------- 107
31_pfamImport  76 ---IRDLE--------MYGLAAh-------RQPKEvLRdvgqglkdvga------------------------------- 106
27_pfamImport  78 ---IEEIQ--------TSGVTSh-------KKAKEvLSdmghglkgvganivdgi------------------------- 114
Q18025        135 ------------------TMVNAPIEFA-QRV--KSAF-SADNVNSTQ-----------------NGTTGApktgqstff 175 Caenorhabditis...
21_pfamImport 124 patwprngrvsssepvedTMSLRPPDFA--MGtlKTTVpAADSRDMAG-------------------------------- 169
9_pfamImport  144 svtsssggaescshlprpSHSPNPSSFNvHILkmKTHYgGSENRSSMP--------------------SGRqsatsqh-- 201
11_pfamImport 112 ------------------AMMNAQLELA-HRV--KSAF-SADNVNSTHn---------------gHIGHGGgktgqstff 154
1_pfamImport  106 ------------------EVIAAPRGIA-HII--KSTFgSADNIPDSI-------------------ASGAsnvghst-- 143
26_pfamImport 110 -------nirdgisglsgSVMSKPREFA-HLI--RNKFgSADNINSISrsseadltednsdkqsgRNHHGSatlpggvgl 179
16_pfamImport 109 -------nirdgitglggSVMSAPREFA-HLFsrSNRFgSADNIAHLAgsr-----------aseGEGARGstlpraga- 168
5_pfamImport  108 -------nirdgisglsgTVMSKPREFA-HLL--KNKFgSADNINSLSrngeng-----stgeedKTHHGSatlpgnctl 172
31_pfamImport 107 -------nirdgitvlsgSVMSKPREFA-HLI--KNKFgSADNINNMTkwfiaepseecatdeteRNHHGSatfthrkfs 176
27_pfamImport 115 --tgfsggvvgnikgakdTMMAKPKEFA-HLI--KNKFgSADNINQIKsleea-------ggtegDKQHGGtlpa----- 177
Q18025        176 ttrk-------sadtdevesnavHKNRGAKRNSStlppnlsltspdplsaykeedssdpesrpGSAADETSNVPYHTADN 248 Caenorhabditis...
21_pfamImport 170 ------------------------TSPDEAASSRvel------------------------------------------- 182
9_pfamImport  202 ------------------spvlgnsSTGESRGWR---------------------------------------------- 217
11_pfamImport 155 tsr--------rsadaedaerpeKLKRDSVRGSStlppnlslnnpdpyasfkdedisepnsrpGSAADETSNLPYHTADN 226
1_pfamImport  144 -------------------fysdtqtNDRIHKLDfenrdvapspakrghkrnetlpsmafdldNLVISSLPEMLPHDEpe 204
26_pfamImport 180 h-------------astagaaasRSEDGASECSSvtse-----------------------sipPRTGPGAPPPPASATT 223
16_pfamImport 169 ----------------apspaqkYVSPEASPSSSvtsega---------------------------------------- 192
5_pfamImport  173 tttttttattvttqgstpgntkkFASDEGSPCSSvtse---------------------slhlGQVTHHHTSPRHNRTSY 231
31_pfamImport 177 ---------------gvgstgtkYTSEDDS--SSitsgsgptagtgtmssprnqpqlslpqalGHASQTATAPTHTLPVI 239
27_pfamImport 178 --------------------sfkYPSEDDNS--------------------------------SILSGSNFEIQSSPLSN 205
Q18025        249 slylp--pnhpyHsahAAPSEEGFNAIHEHLNSILQHL-------MLIDRKYDRLE--DDIKKEI---------KFYAEA 308 Caenorhabditis...
21_pfamImport 183 --------------iaEHLNPNTYTSILQQLADLKEEQ-------VNLEASFEKLR--ENYQHEN---------KFLMNS 230
9_pfamImport  218 ------------------------LKLLDALP-------------EWLQMEVERSG--RDVSMELlciphprmkAWAKNT 258
11_pfamImport 227 slyvttnntyphEksqTTHTDEGFAAIHDHLNSILHHL-------VLIDRKYDRLE--DDIKKEI---------KFYSEA 288
1_pfamImport  205 ---------------vKFTAANTVIELHNDIQELKAQN-------QALFEQLNKLQ--TQNKSEF---------NYFNSA 251
26_pfamImport 224 ------------S----------LEPVWAEL--------------DHLRSKMEHIK--QLVSKDI---------ASLNHS 256
16_pfamImport 193 -------pyptqTnsnNIEASFSLKPILNELKERREDY-------ERIAEKIDALK--N-LSQEV---------SFLSAA 246
5_pfamImport  232 ------------N----------LDPLFRELQERREEI-------EILKEKLENLK--G-VHQEI---------QYLTMA 270
31_pfamImport 240 sahgs--nnvltStsaTQRDSYLLDQVSLKLQERQEEC-------QRLQDEVDSLKveNQLQQEI---------TYFHQA 301
27_pfamImport 206 sq--------ntSqqfPGLTQAALEPILQEMEQIKESNkllsetvTRLTEELDQCK--RWYSTEL---------AALKQV 266
Q18025        309 LEEERFKTTKL-EEILNEAVELQQAEIATLKEQ-NLMATRVDYQHNDRFRNVEENMESLQNHLVRIENALMDvrqvKLTS 386 Caenorhabditis...
21_pfamImport 231 IQEEKHKYRDL-EAQVNDLMDIQQTELMNIKQDlSSMEEKLVYQSYDRARDLWEVIESFQTRIGKLELQQQ-----AAQL 304
9_pfamImport  259 LWEVSYRGRRLmEEQVNDHMQVHLDEILRLKQDlASTEEKMVYQSYEKAKEIWEVMETFQTRISKLEALQQ-----TAQP 333
11_pfamImport 289 LEEERFKTTKL-EELLNEAVELQQAEIASLKEQ-NLMATRVDFQHNDRFRTVEENMESLQNHMVRIENALMDvrqvKLTS 366
1_pfamImport  252 LHEERIKTQRL-EEMLNETIELHQAEMIALKSDlNTIATRMDYQYSDRFRSIEENIESTQNKMIRMEVNVKEw------T 324
26_pfamImport 257 LQEERFRTERL-EEQINDLTELHQNEVENLKQTiTDMEEKVQYQSEERLRDIHEMLEACQTKMSKMEHQQAQhq-qYVTL 334
16_pfamImport 247 LQEERFKAERL-EEQINDLTELHQNEVENLKQAlTDVEEKVQYQSEERIRDIHEALDLCQTKVRRTRSGGG------AGG 319
5_pfamImport  271 IQEEKFRSERL-EEQINDLTELHQNEVENLKQAlTDMEEKVQYQSEERIRDLHEMLENCQTKISKMEHQQAQhq-qYVTL 348
31_pfamImport 302 LQEERYRYERL-EEQMNDLIELHQNEIENLKQGiSDMEEKVQYQSEERLRDMHEMLEI----ISRMEHQQQQhq-qLVTL 375
27_pfamImport 267 FDEERFKYERL-EEQMNDMTELNQNEFSNLRQDiTSMDEKIQYRLDERTTDLQDNVENCQTRITKMELQQQQq--qIISM 343
Q18025        387 NVW----------QRVALNAGNIVVELLKIALFVVASILDLVRPLTGSRNRSAMAFGLVFLAIFFGHHL 445 Caenorhabditis elegans
21_pfamImport 305 EVLenp-----stRAFFAKFMSLVLASITVILVFVSAMTSITIPLVKTRLRTLTTIFLLLLGTSYWWH- 367
9_pfamImport  334 EMVekck---tqaQVFLDKFMNLLVTLTNILLVCITSMSCCPLSLIRSPPRILATLMVIILGAVAWQNW 399
11_pfamImport 367 NVW----------QRVALTAGNIVVELLKIALFVVASILDLVRPLTGSRNRSAMAFGLVFLAIFFGHHL 425
1_pfamImport  325 ESRpqt-----tfNSVMLSGTNILVEFIKLVLLIVSFALDFVKPFTGTRTRAGFVIFFWLALMILT--- 385
26_pfamImport 335 EGLdns-----naRALVVKLINVLLTVLQVVLLLVATFAGILMPFLRTRLRIITTTAVVAGLFIAVKQW 398
16_pfamImport 320 GGGesggaaalppRLLLVKLLNVAITLLQLALLLVATVAGVAMPFLRTRVRVLTTSLAVMLGVMVLKQW 388
5_pfamImport  349 EGIdns-----naRAVVVKLINVLLTVLQVVLLLVATAAGILMPFLKTRLRILSTLVLIAATVFVLKQW 412
31_pfamImport 376 EGIens-----naRALVLKLINILLTVLQVVLLLVATAANILMPFLKTRMRVITTSLLIIAIVLMCRQW 439
27_pfamImport 344 EMVdnv-----tfRTLLTKLINVVLAIVAVVLVVVSTAANLVAPFLTTRARILSSALLVVAIILVGRNW 407
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