Conserved Protein Domain Family
PBC

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pfam03792: PBC (this model, PSSM-Id:367661 is obsolete and has been replaced by 461052)
PBC domain
The PBC domain is a member of the TALE (three-amino-acid loop extension) superclass of homeodomain proteins.
Statistics
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PSSM-Id: 367661
Aligned: 21 rows
Threshold Bit Score: 218.765
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
GAA54358       51 AQLTGRELQQLLSV-AHQSLDEA----QERKQSLNNHRLKPALYSVFCEIKEKTALSLRNsaasaveDEANSPDPQLLRL 125  Clonorchis si...
CDS26508       41 TQVTGRELQELLSV-SHQSIDEA----QERKQALNSHRLKPALYNVFCEIKEKTALSLRStaaasteEELNAPDPQLLRL 115  Hymenolepis m...
P41779          6 PANLSELLDAVLKI-NEQTLDDNd---SAKKQELQCHPMRQALFDVLCETKEKTVLTVRNq------VDETPEDPQLMRL 75   Caenorhabditi...
7_pfamImport    1 SSSYDDLIRRLNDI-SNLSLEDId---SSRKESLRRHPLKDALFSALCEVKEKTALSIRAg------PEEQPEDPQLMRL 70  
EFP03695        5 KAPVQNLLDQLCKI-NEMPLDFDa--vAKLKQSIRTNPLHQSIQSVLVEKKQQLFLSPQMikeecveNEE--------RL 73   Caenorhabditi...
1_pfamImport    1 RKPIQHFLDELIKI-STMEPDVDv--mANLKQSMRSNPFYPVIREVLIEQKERTVLSTQMikeelieDEEE-------RS 70  
Q19503          5 SKSIMDLLSEVVKI-TDMTMDNEa--vNKLKPQIKINPFYRAVQDVLVEQKSKIDLSTKMmkdleaqENDE-------RL 74   Caenorhabditi...
PDM63182      717 mapVSDLVQRLEML-TVLPLENNt--vEQGTYRLKNHYLYSTMFSIFVDLKERTRMVV---------HEEDEKDPQ-IRL 783  Pristionchus ...
XP_001606728   54 RKDINELLQQVMSI-QTQTIDSSpvsvNESKWALYNHPLMPALFNVLCEFKEKTGLSLRHt-----hEEDLQPDAQLMRL 127  jewel wasp
XP_001606748   78 TQSLKKLLEELRKLpQDQDVTEPg--tQEKKIALNNHRLFPILRNVLCDLKKESYGKRGQrqffadeKPENKPNEQLIRL 155  jewel wasp
GAA54358      126 DKMLVAEGVTGPgaglanDLGDSSGDLAAHgglgggggmGDCNQIEHADYRAKLAQIRQIYHAELEKYKSACDEFTGHVI 205  Clonorchis si...
CDS26508      116 DKMLIAEGVTGTn-----DIGDFDGASGMA---------GDSGQIEHADYRVKLTQIRQLYHTELEKYKNACDEFTGHVV 181  Hymenolepis m...
P41779         76 DNMLVAEGVAGP------DKGGSLGSDASG--------------GDQADYRQKLHQIRVLYNEELRKYEEACNEFTQHVR 135  Caenorhabditi...
7_pfamImport   71 DNMLLAEGVSGP------ERGLNVSADVSG--------------ADQTDYKSKLTQIRQVYGTELNKYEEACAEFTRHVT 130 
EFP03695       74 DNMLRAEGITDN------HDNVKHEFELGG--------------DDQDEYRRELANVRKKFAESMKLCQENRANFCETVK 133  Caenorhabditi...
1_pfamImport   71 NKMLEKEGITGP------DYSI--SPEAIG--------------SDQDEYRQKLKLVRKSFEENMNNYAVNCRDFSENIR 128 
Q19503         75 DTMLKAEGVAGP------DDSLLRIQEAAG--------------TDQYEYRQQLLKVRRELENETKAFDKHCKKWCEYVE 134  Caenorhabditi...
PDM63182      784 DNMLAAEGVIGP------EKDLPASLNNQP--------------LDQDDYRYQLHNIRQQFEMEMSEREHHQQTFINNTR 843  Pristionchus ...
XP_001606728  128 DNMLIAEGVTEP------NKAGGSAAARASs--------QIDSAIEHYDYRSKLATIRQWYHQELKKCERDTSVFTDHVM 193  jewel wasp
XP_001606748  156 DKMLIAEGIAEPql---dDTCATLAKLEAS---------LGPHGIGNQDYRDKLKLVKVWYHGELAKYNMHCKSFKEHVR 223  jewel wasp
GAA54358      206 NLLREQSRSRPISPAEIELMVGIIRRKFRAIETQLKQSTCEAVMILRSRFLD 257  Clonorchis sinensis
CDS26508      182 NLLREQSRSRPISSTEIELMVGIIRRKFRAIETQLKQSICEAVMILRSRFLD 233  Hymenolepis microstoma
P41779        136 SLLKDQSQVRPIAHKEIERMVYIIQRKFNGIQVQLKQSTCEAVMILRSRFLD 187  Caenorhabditis elegans
7_pfamImport  131 QLLNEQSSLRPISNREIERMVGIIQKKFSGIQVQLKQSTCEAVMILRSRFLD 182 
EFP03695      134 YVLHSHGEFRPITHSAIEKMAQIVSNKFSKVSELLKQSTCESVIQLRRRYFD 185  Caenorhabditis remanei
1_pfamImport  129 SILREQSEFRPITATAIEKLLSMTGNKMNRIIKLLKHSACAAIIHLQKRYFD 180 
Q19503        135 DVLQQQGEFRPITQQSTEKFMNKMSGKFNKVCFVLKQTACEEVIQLKKRYLD 186  Caenorhabditis elegans
PDM63182      844 QLMKLQSETRPISELDLGRVESAVRKKLVYYQIQLKQETCEQIMTLKSKFCD 895  Pristionchus pacificus
XP_001606728  194 TLIKEQGAVRPINSKEGEKTVQIIQKKLSNIQIQLKQQTCEAVMSLRSRFLD 245  jewel wasp
XP_001606748  224 TLLAEQCATRPISVEEAERTIDMIHRKFEAVQIVLKQQTCESVMTLRSRCLD 275  jewel wasp
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