6DJP


Conserved Protein Domain Family
Integrin_alpha2

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pfam08441: Integrin_alpha2 (this model, PSSM-Id:369878 is obsolete and has been replaced by 462478)
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Integrin alpha
This domain is found in integrin alpha and integrin alpha precursors to the C-terminus of a number of pfam01839 repeats and to the N-terminus of the pfam00357 cytoplasmic region. This region is composed of three immunoglobulin-like domains.
Statistics
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PSSM-Id: 369878
Aligned: 38 rows
Threshold Bit Score: 351.625
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6DJP_A    437 ARPVITV-NAGLEVYPSIl-NQDNKT--CSLPg--TALKVSC--FNVRFCLKADGKGV------LPRKLNFQVELLLDKL 502  human
EDO48984  483 SRPIIDI-NTDVNITPNPf-NSRNKT--CSKTfkgKLIQTVC--IDIEICLSYSERRNrt---hDKLSIDLNIEADVEYT 553  starlet sea anemone
Q03600    495 SRPVISI-ETKHKMEKRMv-DIDKGVn-CPRG------AKTC--FPLDMVIYVDEETKrgaelvDFSSDVFMCNLEAIPF 563  Caenorhabditis el...
Q7QF51    468 ARPIINIrTYEEQQAGEPg-SIDPTRvgCPSD---PTANVTC--FSFRACSAVDDASLsegdvsADSSLQLRCTIQAET- 540  Anopheles gambiae...
Q29JH5    370 ARPIINI-QTSYRSEELRniDPNQPG--CRAD---AFSNLTC--FTFEACCSIEPYDD------STKELSLMYSVEAETY 435  Drosophila pseudo...
Q17KN9    418 ARPITNI-KTSVMIEELQ--NIDPTKhgCRAD---PTANATC--FSFKACCSIEPYEEsghsssSTQPLNLIYTIEAETY 489  yellow fever mosq...
P13612    463 TRPVVIV-DASLSH-PESv-NRTKFD--CVEN----GWPSVC--IDLTLCFSYKGKEV-------PGYIVLFYNMSLDVN 524  human
Q13797    459 ARPVITV-DVSIFL-PGSi-NITAPQ--CHDG----QQPVNC--LNVTTCFSFHGKHV-------PGEIGLNYVLMADVA 520  human
Q24247    479 ARPIISI-QTSVQRKELH--NMDPNTpgCLDD---PASNLTC--FTFRACCSIEPYDE------KNKELRLAYSVEAETF 544  fruit fly
CAG08300  486 ARPVVHI-GSTLQVTPNNi-DRDKIK--EQCD---MSLP-SCsnFAARACFSYTAHPEs-----FSPKLILDYTFEADIK 552  spotted green puf...
6DJP_A    503 --KQK-GAIRRALFL-----------------YSRSPSHSKNMTISRGGLMQCEELIAYLRD--EseFRDKLTPITIFME 560  human
EDO48984  554 rnSRT-SKQSRVVFSt---------------sEGPALNKTLTDALPHKPRKACFLEEVFLRE--N--VEDVYPDITFRIN 613  starlet sea anemone
Q03600    564 ---RA-DTTARGFIE-----------------GSHSHNYSWPCGSNSHVQKRTYRQLIYL-PvqE--SKDWITPLKFRFT 619  Caenorhabditis el...
Q7QF51    541 ---FL-NKFSRVYFGtgggpgadktpavpgaaATRTNILKRRFRLAVSGRPVCHDVTAYLKE--G--TRDIQNPIQFRIS 612  Anopheles gambiae...
Q29JH5    436 --DHL-KKFSRAFFDr---------------dNKRSNVISRVVKVRTDGRVACQMVTGYIKA--N--TRDIQTPISFRLK 493  Drosophila pseudo...
Q17KN9    490 --NNL-KKFSRVYFGpd--------------tRNRSNTLRKHISVITDGRQECREEVVYIKD--N--TRDIQNPIRFRLN 548  yellow fever mosq...
P13612    525 --RKA-ESPPRFYFS-----------------SNGTSDVITGSIQVSSREANCRTHQAFMRK--D--VRDILTPIQIEAA 580  human
Q13797    521 k-KEK-GQMPRVYFVl----------------LGETMGQVTEKLQLTYMEETCRHYVAHVKR--R--VQDVISPIVFEAA 578  human
Q24247    545 --DHL-KKFSRVFFFdr--------------eNKRTNVLSRVVRVHTNGRTECQAVTGYIKA--N--TRDIQTPVRFRLK 603  fruit fly
CAG08300  553 --RKKaRLPPRVDFL-----------------G----VPRGRLELPGQKRKICTDIELRLLR--D--FKDWLHAIPISVT 605  spotted green puf...
6DJP_A    561 YRL--------------DYRTAADTTGLQ--PILNQf--TPANISRQAHI-LLD-------------------------- 595  human
EDO48984  614 YKMhep--------svpPTAAPGTLSSLKdyAMLETk--KGSFASAMLKF-QRDcvkcepnlqisdksdscsrvpvhvsl 682  starlet sea anemone
Q03600    620 VSIrnek-------kpvQPPQGSQLVDLKhyPVLNK---YGASYEFDVPF-NTL-------------------------- 662  Caenorhabditis el...
Q7QF51    613 YTLdeeranggtgaggrRGRKERELPRLE--PILNR---TAAERTYTMPF-QKD-------------------------- 660  Anopheles gambiae...
Q29JH5    494 YTLe------------ePPLADSALTRLN--PMLDQ---TQAHIDFEGTF-QKD-------------------------- 529  Drosophila pseudo...
Q17KN9    549 YTIl------------dTTLPASALDTLD--PILDQ---TQADRTFEATF-QKD-------------------------- 584  yellow fever mosq...
P13612    581 YHLgph---------viSKRSTEEFPPLQ--PILQQk-kEKDIMKKTINF-ARF-------------------------- 621  human
Q13797    579 YSLse----------hvTGEEERELPPLT--PVLRWkkgQKIAQKNQTVF-ERN-------------------------- 619  human
Q24247    604 YSLv------------ePPLADSALVRLN--PILDQ---TQAHVDFEGTF-QKD-------------------------- 639  fruit fly
CAG08300  606 ASLg--------------DSTQWTSERVT--PVLDLf--QPKYTVSEINItNRG-------------------------- 641  spotted green puf...
6DJP_A        --------------------------------------------------------------------------------      human
EDO48984  683 tgsvlvlelfsstgtcqsnrkcscplelfsstgtcqsnrkcscplelfsssgtcqsnrkcscplelfsstgtcqsnrkcs 762  starlet sea anemone
Q03600        --------------------------------------------------------------------------------      Caenorhabditis el...
Q7QF51        --------------------------------------------------------------------------------      Anopheles gambiae...
Q29JH5        --------------------------------------------------------------------------------      Drosophila pseudo...
Q17KN9        --------------------------------------------------------------------------------      yellow fever mosq...
P13612        --------------------------------------------------------------------------------      human
Q13797        --------------------------------------------------------------------------------      human
Q24247        --------------------------------------------------------------------------------      fruit fly
CAG08300      --------------------------------------------------------------------------------      spotted green puf...
6DJP_A    596 -------------------------------------------------CGEDNVCKPKLEV-SVDSDQKK--------- 616  human
EDO48984  763 cplelfsssgtcqsnrkcscplelfsstgtcpsnrkcscplelfsstgtCQSNGKCSCPLELfSSTGTCQSngkcscpl- 841  starlet sea anemone
Q03600    663 -------------------------------------------------CGEDHTCQTDLSL-KAAFKDIPlt------- 685  Caenorhabditis el...
Q7QF51    661 -------------------------------------------------CGVDGLCQSALVI-QNATLVGLarsgga--- 687  Anopheles gambiae...
Q29JH5    530 -------------------------------------------------CGDDDLCESDLVI-RAEPNITAidn------ 553  Drosophila pseudo...
Q17KN9    585 -------------------------------------------------CGHDGICQSKIDV-KAKLSLEQqvdg----- 609  yellow fever mosq...
P13612    622 -------------------------------------------------CAHEN-CSADLQV-SAKIGFLKphen----- 645  human
Q13797    620 -------------------------------------------------CRSED-CAADLQL-QGKLLLSSmdek----- 643  human
Q24247    640 -------------------------------------------------CGDDDLCESNLII-RVEPNITEssgn----- 664  fruit fly
CAG08300  642 -------------------------------------------------CGSDNICQSNLSL-EYRFCSRQmensksvfr 671  spotted green puf...
6DJP_A    617 --------IYIg-DD--NPLTLIVKAQNQG-EGAYEAELIVSI-PLQADFIGVVrn----------------nEALARlS 667  human
EDO48984  842 -elfssyyITLavGE--RDYVVDVTISNTG-ESAYNTELLVTI-PEGVAQSRVLdas--------------dtDKEAFsI 902  starlet sea anemone
Q03600    686 ------snGYVsnVGekDYLDLTFTVENKK-EKAYQANFYLEYnEEELELPQVQ-------------------------- 732  Caenorhabditis el...
Q7QF51    688 --aggeyqLVLg-LD--RTLTLALTVQNRA-DSAYETHLYVRH-DASLTYAGSK----------------------GSsV 738  Anopheles gambiae...
Q29JH5    554 -----kytLIL--DE--TELEVGISVSNLA-DSAYEAQLFISH-QAGVSYVATK-------------------KPTNA-T 602  Drosophila pseudo...
Q17KN9    610 -----sysLVLg-RD--RGILLNVSVSNQA-DSAYETHLYVKH-DPSISYSGTKvyseckrnrkpfiynnapfHFQSLhT 679  yellow fever mosq...
P13612    646 -----ktyLAVg-SM--KTLMLNVSLFNAG-DDAYETTLHVKL-PVGLYFIKILe------------------LEEKQiN 697  human
Q13797    644 -----tlyLALg-AV--KNISLNISISNLG-DDAYDANVSFNV-SRELFFINMWq------------------KEEMGiS 695  human
Q24247    665 -----eytLIL--DE--TELEVRINVSNLA-DSAYEAQLFIAH-QAGVSYVATK-------------------KPTNA-T 713  fruit fly
CAG08300  672 slsrkdgvAVItpTE--EDIALEMTVTNRGgDDAHQTRSIISL-PDTLHYSSVVt-----------------tASEPKvD 731  spotted green puf...
6DJP_A    668 CAFKTENqt----rQVVCDLGNPMKA--GTQLLAGLRFSVHQQSE---------MDTSVKFDLQIQSSNLFDK---VSPV 729  human
EDO48984  903 GHQAVSDktennstRLRIPIGNPMKT--RTMKRVQVFLNTGSFSK---------SQDFLPILLEVTSSNKEQPeqlKDNL 971  starlet sea anemone
Q03600    733 -GSKRMIaetigknIVHLPLGNPMNGasKHQFTIQFKLTRGRTEG---------IGKALKFMAHVNSTSQETEeelKDNK 802  Caenorhabditis el...
Q7QF51    739 CGAHNAT-------MVDCSIGNPLKR--NGEVQLSLRFDARSLEEygsskgpngLSQHVALAVFVNTTSQDTG---NRTR 806  Anopheles gambiae...
Q29JH5    603 CNSFNTT-------LVVCSLGNPMLR--GTTTFVTIRFQPKSLEP---------NENSMLFHIFANTTSKLVGg--EPPE 662  Drosophila pseudo...
Q17KN9    680 CTQFNST-------LVDCSLGNPMRR--GTEAKLSLRFDPQRVDD---------LVSKLTFQVFVNTTSALLEgtkSEAS 741  yellow fever mosq...
P13612    698 CEVTDNSgv----vQLDCSIGYIYVDh-LSRIDISFLLDVSSLSR---------AEEDLSITVHATCENEEEMdnlKHSR 763  human
Q13797    696 CELLESD-------FLKCSVGFPFMRs-KSKYEFSVIFDTSHLSG---------EEEVLSFIVTAQSGNTERSeslHDNT 758  human
Q24247    714 CNSYNTT-------LVACSLGNPMLR--DTTTFVTIRFQPKGLEP---------SEKIMLFHIFANTTSKLVGperPERD 775  fruit fly
CAG08300  732 CTANDKGt------LIDCELGNPIEK--DAEVTFYVMLTTSGISL---------STKAVNISLQLQTTSTQV-----LKP 789  spotted green puf...
6DJP_A    730 vsHKVDLAVLAAVEIRGVSSPDHV-F--------------LPIPNWEHKEnpeTEEDVGPVVQHIYELRNNGPS--SFSK 792  human
EDO48984  972 ieLNVTIVSQADLELSGSFKQEQV-Sy-------------GGEVKGESAMr--VEDEIGNEVRHTYIAQNKGPD--FVPE 1033 starlet sea anemone
Q03600    803 weAEVQIIKKAELEIYGISDPDRV-F---------------FGGKARAESeleLEEDIGTMVRHNYTIINHGPW--TVRN 864  Caenorhabditis el...
Q7QF51    807 aqLNLRIQRAVKLSISGKALPEQV-Fyg----------ggGEQIMGESAIh--SLDEIGMPVQHKYQIYNDGPW--RAPM 871  Anopheles gambiae...
Q29JH5    663 rnLSVSVVRQAKLHFRGWAMPEQS-Fy-------------SGASQVTDNSp-mEMVDVGSQVNHSFTIFNDGPS--TAPK 725  Drosophila pseudo...
Q17KN9    742 --IVANVIKRAKISISGAAHPEQA-Fy-------------GGDVKGESAMe--TVEDIGTAVQHIYLIYNDGPW--RAPK 801  yellow fever mosq...
P13612    764 vtVAIPLKYEVKLTVHGFVNPTSF-V------------------YGSNDEn-ePETCMVEKMNLTFHVINTGNS--MAPN 821  human
Q13797    759 lvLMVPLMHEVDTSITGIMSPTSF-Vy-------------GESVDAANFIqldDLECHFQPINITLQVYNTGPS--TLPG 822  human
Q24247    776 --LRVNVVRRAKLNFRGWAIPEQS-FysgssvansvantaATDIEGHGPM---GMDDVGSQVHHMFTIFNEGPS--TAPK 847  fruit fly
CAG08300  790 veASAKVFFELKLQLYGVARPSQVsF--------------GRSLEGKSTIn--SVEEIGALVQYEFRITNLGRSlkYFTN 853  spotted green puf...
6DJP_A    793 AMLHLQWPYKYNNNT--------LLYILHYd--------IDGPMN-CT----------------SDMEINPLRI------ 833  human
EDO48984 1034 AEVVIQWPFEATNGKh-------LLYLMDVe--------ISGNAE-CTf---------------APDQPNLLGLivkpks 1082 starlet sea anemone
Q03600    865 VEAHISWPYQLRSRFgrg---knALYLLDVptitteftdGTSEVRkCFik-------------qQYEYVNPAEIk----- 923  Caenorhabditis el...
Q7QF51    872 VRLEIDWPLQVANNKpqg---kwLLYLDALpvldmsgimGDGRST-CDvlrkdepdgavvaggdSVPLVNPLGL------ 941  Anopheles gambiae...
Q29JH5    726 VRMIIHWPWSLYSDPerghmdlyLLYLEQMpt------vEIGVGE-CHv---------------APEYVNPLKLasgsqe 783  Drosophila pseudo...
Q17KN9    802 VQVNIQWPHQVANDKpqg---kwLLYLTDTpt-----veATNGGD-CVv--------------dPHSAINPLGLkkssv- 857  yellow fever mosq...
P13612    822 VSVEIMVPNSFSPQTd------kLFNILDVq---------TTTGE-CH----------------FENYQRVCAL------ 863  human
Q13797    823 SSVSISFPNRLSSGGa------eMFHVQEMv-------vGQEKGN-CS----------------FQKNPTPCII------ 866  human
Q24247    848 VQMVIHWPYSLYSDPqsgrpvqyLLYLEQVpt------vEVSQGE-CHv---------------AKEYVNPLNLasgsre 905  fruit fly
CAG08300  854 ASLNIFWPKENSLGKw-------LLYLTQTsn------tGVQSVP-CS----------------PVKEINPLKN------ 897  spotted green puf...
6DJP_A    834 ----------------------KISSLQTTEKNDTvagqgERDHLITKRDLALSEG----D------------------- 868  human
EDO48984 1083 ----------------sparnvTSRQSSSESTRTT-----RVRRAVEEETSIKTKRatadErg----------------- 1124 starlet sea anemone
Q03600    924 ----------------------LNTKYSTQETAPH-----RVEHRMKREIDEDEEEqsddLgaveenipwfstanfwnlf 976  Caenorhabditis el...
Q7QF51    942 --------------------------PSRTGPSAP-----PSPFTALRSANYTRAGrvrrDramvlr------------- 977  Anopheles gambiae...
Q29JH5    784 sasgf------lgapatlmmvhGRSQLNKNQTHST-----HSTHSRQQRSTLERVTrlerLiyepeaagmg--------- 843  Drosophila pseudo...
Q17KN9    858 ------------------lgqlMQMERYTQRAYNK-----SLTFTSEKSERISFAKqtssAsentlnrvrrdrsmiirae 914  yellow fever mosq...
P13612    864 ----------------------EQQKSAMQTLKGI-----VRFLSKTDKRLLYCIKad---------------------- 894  human
Q13797    867 ------------------------PQEQENIFHTI-----FAFFTKSGRKVLDCEKpg---------------------- 895  human
Q24247    906 npaylsapaqmrmfpsqsrhsfNKSLIHSQRSYYS-----SSHRDDHSDDTQSNRNrvrrSflervtrlerlmyd---pe 977  fruit fly
CAG08300  898 ----------------------VKGL-SRKKREAE-----LEALTSGDFSFLPTKRk----------------------- 926  spotted green puf...
6DJP_A    869 -----------IHTLGCGVA--QCLKIVC 884  human
EDO48984 1125 ----------sSVKLDCETGtaRCTPIRC 1143 starlet sea anemone
Q03600    977 aikggdgrpreVKHLSCQDNtaNCFTVIC 1005 Caenorhabditis elegans
Q7QF51    978 -----pqagdgAVQMDCASQtaKCVRIVC 1001 Anopheles gambiae str. PEST
Q29JH5    844 --ssgsgkkqdIVELDCNKGtaRCIRIEC 870  Drosophila pseudoobscura
Q17KN9    915 rltdkdgkqtdIVHMDCKRNtaKCISIVC 943  yellow fever mosquito
P13612    895 ---------------------pHCLNFLC 902  human
Q13797    896 ---------------------iSCLTAHC 903  human
Q24247    978 ssnaangkkqdIVELDCNKGatNCVRIEC 1006 fruit fly
CAG08300  927 -----------YKTLTCADGl-RCVEICC 943  spotted green pufferfish
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