5EMO


Conserved Protein Domain Family
Qua1
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pfam16274: Qua1 (this model, PSSM-Id:406639 is obsolete and has been replaced by 465079)
Qua1 domain
This domain, approximately 40 residues in length, is mainly found in KH-domain containing, RNA-binding, signal transduction-associated protein 1 from yeast to human. It forms a homodimer composed of a perpendicular interaction of two helical hairpins, and the Qua1 domain is sufficient for homodimerization which is required for the regulation of alternative splicing.
Links
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Statistics
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PSSM-Id: 406639
Aligned: 14 rows
Threshold Bit Score: 70.8755
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5EMO_A         6 KYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGEGK---DEEKYIDVVINKN 55  human
XP_002609602  12 KYLPQLLAEKDSLDPSFVHASRLIEEEISKLEKDDKSk--EPPKYKEVHTDKP 62  Florida lancelet
XP_001364980   5 KYLPELMAEKDSLDPSFVHATRLLAEEIEKFQGSEGKkddEEKKYLDVISNKN 57  gray short-tailed opossum
XP_001370780   4 KYLPELMAEKDSLDPSFTHALRLVNQEIEKFQKGESK---EEEKYIDVVINKN 53  gray short-tailed opossum
1_pfamImport   1 RALEALKQRLDGLFPEMSHVIQILSLEIDKIQKGESKk-dEEETYLDLFSHKN 52 
XP_011614545   5 KYLPELLAEKDSLDSSFTHAMKLISAEIERIQKGETKkepEKETYLDLFATKN 57  torafugu
Q6NW62         6 KYLPQLLAERDSLDPSFTHAMKLISAEIEKIEKGDTEk--DTESYLDLFTMKN 56  zebrafish
XP_007249462   6 KYLPQLLAERDSLDGSFIHAMKLISAEIERVQKEEAPe-kDNEAYLDLFTAKN 57  Mexican tetra
XP_012812472   6 KYLPELMAEKDSLDPSFTHAMSLLGKEIERLKKGGDAkkdEEDTYLDLFSHKN 58  tropical clawed frog
2_pfamImport   1 KYLPELMAEKDSLDPSFTHAMQLLTAVLEGIGFFWEQe-pGSDGILEIFSPKN 52
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