Conserved Protein Domain Family
RED_C

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pfam07807: RED_C 
RED-like protein C-terminal region
This family contains sequences that are similar to the C-terminal region of Red protein. This and related proteins are thought to be localized to the nucleus, and contain a RED repeat which consists of a number of RE and RD sequence elements. The region in question has several conserved NLS sequences. The function of Red protein is unknown, but efficient sequestration to nuclear bodies suggests that its expression may be tightly regulated or that the protein self-aggregates extremely efficiently.
Statistics
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PSSM-Id: 462272
Aligned: 13 rows
Threshold Bit Score: 152.921
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDS42869            478 YDECYPGFAESYDAMG-DSDEE-TDFSKMDMGNK-KG-PVGRWDFETQEEYGDYMSSLEAMPRAAYQYGVKKPE-GRKTR 552
EFX85643            390 YAECYPGFEEMNDALE-DSDDE-ADYSKMDLGNK-KG-PVGRWDFDTAEEYGDYMNKKEALPKAAYQYGIKMAD-GRKTR 464
WGS:AAPP:GF18429-PA 433 YAECYPGLEEMNDAID-DSDDE-VDYTKMDLGNK-KG-PIGRWDFDTQEEYSDYMSTKEALPKAAFQYGVKMQD-GRKTR 507
XP_009028213        399 YAECYPGMMESVDALG-DSDDE-ADYTKMDQGNK-KG-PVGRWDFETQEEYSTYMSAREAMPKAAFQYGVKMAD-GRKTR 473
XP_002600932        424 YAECYPGMGEILGGD--DSDDE-VDYTKMDQGNK-KG-PIGRWDFDTQEEYSEYMSNKEALPKAAFQYGIKMAD-GRKTR 497
XP_001629252        417 YAECYPGAMEVADTTY-DSDDD-ADYTKMDLGNK-KG-PIKRWDFEDEEQYNSYMETREALPKAAFQFGIKMSE-GRKTR 491
XP_002117518        433 YAECYPGAMEVDDAMA-DSDEE-ADYSKMDMGNK-KG-PVGRWDFENEEDYNKYMEKREALPKAAFQFGVKMAD-GRKTR 507
Q9N4U5              428 YDECYPGGLVEMGGAW-DSDEE-ADYSKMDAGPK-KNqAVNRWDFDTEEEYASYMEGREALPKAAYQYGVKNGEgGRKNK 504 Caenorha...
XP_002952015        546 YAECYPGMAGYVGALV-DSDDEgGDLNHMDSKQA-KG--KTRADFATDEEWQRYKESRETLPRAAFQYGVKRAD-GRKSH 620
XP_002880800        450 YSECYPGYQEYNHEIV-GSDEE-ADLSKMDMGGKaKG-GLHRWDFETEEEWEKYNEQKEAMPKAAFQFGVKMQD-GRKTR 525
1_pfamImport          1 YAECYPGAPENDDAIL-DSDDE-VDFSKMDVGSK-KS-TVGRWDFDTQEEYGEYMSKKEALPKAAFQYGVKMAD-GRKTR 75 
XP_002129642        411 YAECYPSTQFNIAGLGeDSDDE-ADYSKMDNGHK-KG-PVGRWDFDTQEEYSSYMSKKEAMPKAAFQYGIKMSG-GRKTR 486
KAE9440144          379 YAECYPGLDEMQDAIE-DSDDE-VDYTKMDQGNK-KG-PVGRWDFDTQEEYSQYMNTKEALPKAAFQYGVKMVD-GRRTR 453 Apolygus...
CDS42869            553 RLGggggpggSqKNERAEVDRQLQQITSLINKRKQMAQEAG--DA 595
EFX85643            465 NKTvv---ktD-KTEKAELDREWQKIQSILHKRKGGPSGEP--QK 503
WGS:AAPP:GF18429-PA 508 KNKt------E-KNEKAELDREWQKIQTIIQKRKMPKDGGG--GG 543
XP_009028213        474 RAG-------P-RDDKKELDREWSKIQNIISKRKPGDDIAL--GN 508
XP_002600932        498 RAG-------P-KDEMKELDREWKKIQNIIEKRKTKSGGGA--SS 532
XP_001629252        492 RTG-------P-KDEKTKLDRDWQRISRMLATKSKSEEDGE--RG 526
XP_002117518        508 RQG-------V-KDDKSKLDREWQQISNIIKKRKEMGTGGP--VS 542
Q9N4U5              505 KQS-------A-VSDAKRLDRELNEINKIMDKRKAGGDGAG--GG 539 Caenorhabditis elegans
XP_002952015        621 KELekg-avvEqRQRDQKLDGQLRKIERLLQDKGHDHGQAF--AR 662
XP_002880800        526 KQN---------RDRDQKLNNELHQINKILTRKKMEKEGGD--VA 559
1_pfamImport         76 RIPt------K-KDEKAKIDRDLQKINAILSKRKPAESGEA--SS 111
XP_002129642        487 RTR-------E-QNEKQKLNRELQQIQQIITKRKGGPSSSG--DY 521
KAE9440144          454 KHNk------E-KNERAELDREWNKIQNIIQKRKGPDGSSTepGT 491 Apolygus lucorum
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