3TXV


Conserved Protein Domain Family
GatZ_KbaZ-like

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pfam08013: GatZ_KbaZ-like 
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D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ-like
Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases. However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity. This entry represents GatZ and KbaZ subunits. This entry also includes the D-tagatose 6-phosphate 4-epimerase Atu3167 from Agrobacterium fabrum which catalyzes the epimerization of D-tagatose 6-phosphate to D-fructose 6-phosphate. It should be noted that the previous suggestion of a tagatose 6P-kinase function for other members of this family has been debated.
Statistics
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PSSM-Id: 429785
Aligned: 46 rows
Threshold Bit Score: 545.209
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3TXV_A           8 LIDIARWSERPGPR-GIPSICSAHPLVIEAAXLRAHREKAPVLIEATCNQVNQDGGYTGXTPEDFTRFVGAIADRIEFPR 86  Sinorhizobium...
WP_011808974     4 LRDINQRNRSAGVA-CTPSVCSAHPQVLLASLLLAQSRQRPLLVEATSNQVNQFGGYTGMQAADFIAHVQRIGQAHGIDR 82  Verminephroba...
WP_013253691     5 FEELITARENDDPF-SLYSVCSANQLVLETAVRRSVRSGLPLLIEATANQVNQEGGYTGMRPSDFAARLQGLCDRYGADR 83  Sediminispiro...
jgi:Shel_14550   4 MQEIVQKNKSGRRV-GIYSCCSANEDVIRAALLRAYKTGTPALIESTSNQVNQMGGYTGMTPFDFADFVKGLAEELCVPF 82 
A9CES6           5 LENLAAARRAGKPA-GITSVCSAHPVVLRAAIRRAAASQTAVLIEATCNQVNHLGGYTGMTPRDFVAFVNSIAAEEGLPA 83  Agrobacterium...
vbi:Arad_12388   6 LSELARNRTAGGPAiGVTSVCSAHPLVLRAALRYGRDKSSTVLIEATCNQVNHLGGYTGMTPSDFAALVFEIADDEQCPR 85 
jgi:Oant_0288    7 LSALPARYASGVRG-GITSICSAHPLVIEAALLEGIATSTDVLIEATCNQVNQDGGYTGMTPADFRRFVEDIAARVGFDT 85 
vbi:Arad_9624    8 LANMPRSRGSDLPS-GITSVCSAHPLVIEAALSHAKGRNADVLIEATCNQVNQDGGYTGMTPADFRAFVEKIAAAVGFPL 86 
WP_003619561     6 LMKLVQDRRAGKCS-GIVSVCSAHPLVIEAAFRQGLMENTAVLIEATCNQVNHRGGYTGMTPEKFRIFVEKIARQVSFPV 84  Komagataeibac...
WP_011751066     6 LKSIAEWRDRPGPS-GIPSICTAHPMAIEAAMRCTAPTPLPLLIEATCNQVNQDGGYTGMTPADFRRFVEEIAARTGFPL 84  Paracoccus de...
3TXV_A          87 EKILLGGDHLGPNPWKHLPADEAXAKAEAXITAYAKAGFTKLHLDTSXGCAGE--PTALPD-ATTAARAARLAAVAEDAV 163 Sinorhizobium...
WP_011808974    83 SLVLFGGDHLGPQVWRDQDAHSAMAHASALVASYVQAGFGKIHLDCSEGCAGE--AAQVGD-ALSAQRAAQLARVCEQAA 159 Verminephroba...
WP_013253691    84 ESIVFGGDHLGPYPWRKLAAEKAMQSAETLVRAFVAAGARKIHLDASMHLGGD--TTAVPDpRIAASRAAQLCRAAEDEY 161 Sediminispiro...
jgi:Shel_14550  83 SQVILGGDHLGPLPWTNLNEDEAMENACRLAADCVLAGYEKIHLDTSMRVASDdpDQPFLT-ATCAERGARMCQAAEEAF 161
A9CES6          84 ELLIFGGDHLGPNPWRREKAEDALTKAAAMVDAYVTAGFRKIHLDASMGCAGE--PAALDD-VTIAHRAAKLTAVAEKAA 160 Agrobacterium...
vbi:Arad_12388  86 ELIVLGGDHLGPNPWRDLPAEAALAEAMKMVSAYVEAGFRKIHLDASMGCKGE--PAALDD-ETTAHRAARLASAAEEAA 162
jgi:Oant_0288   86 KRLILGGDHLGPNPWKHLPAEEALAKSDVMIDAFVRAGFTKIHLDTSMGCAGE--PVALPD-AVTAERAARLAKVSEAAA 162
vbi:Arad_9624   87 DRLILGGDHLGPNPWKHLPSSEAMRKAGAMIDAFAAAGFTKLHLDTSMACADD--PTALPD-ETIASRAAELAAISEARI 163
WP_003619561    85 ERIIMGGDHLGPNPWKNLSADAAMTEARAMVEAYAKAGFTKLHLDTSMGCSGE--PIALSD-SLTASRAATLAKVAEDAV 161 Komagataeibac...
WP_011751066    85 ERLILGGDHLGPNPWKSLPADQAMAKAEVMIRAFAAAGFTKLHLDCSMGCAGE--PVALDD-AQTAARAARLAAAAEEAR 161 Paracoccus de...
3TXV_A         164 Ggr-----gGVLPVYIIGTEVPIPGG-----ALEELDT--LEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPG 231 Sinorhizobium...
WP_011808974   160 Rn-------PQALSYVVGTEVPPPGG-----ARAEDGAmrVPPTSAQSARLTIAAHQQAFAQQGLHEAWGRVTGLVVQPG 227 Verminephroba...
WP_013253691   162 EkaatkgkpFLPPVYVIGTEVPVPGGtldddAEPETGP---APTSYASLLSTLELHEEAFYSFGLHDAWRRVIGVVVQPG 238 Sediminispiro...
jgi:Shel_14550 162 KeykkshpdAVQPVYVIGSEVPVPGG--------DFNAgeMGVTTASDATNTIRIYREAFERHGLHDVFDRVVGIVIEMG 233
A9CES6         161 Tea-----gLPKPLYILGTEVPVPGG-----ADHVLET--VAPTEPQAARNTIDLHREIFAQHGLSDAFERVIAFVVQPG 228 Agrobacterium...
vbi:Arad_12388 163 Srv-----gGGKPIYIIGTEVPPPGG-----ADHALSA--IEPTAASAARKTIDVHRKVFADAGLGDAFTRAIGLVVQPG 230
jgi:Oant_0288  163 Hea-----gYDLPVYIIGTEVPIPGG-----AMEEIEE--LELTKPGAAVETVAIHRKAFAALGLEDAFARAIGVVVQPG 230
vbi:Arad_9624  164 Rqs-----kTQAPSYIIGTEVPVPGG-----AFEALDH--LHVTTPGDARATVELHRTAFSRLGLNEAFERSIGIVVQPG 231
WP_003619561   162 Rer-----gTEAPVYVIGTEVPIPGG-----ALEAIDS--LEVTKPNAAIATLDIHRRAFEAAGLSDAFIRVIAAVVQPG 229 Komagataeibac...
WP_011751066   162 Pq------gGIAPVYVIGTEVPIPGG-----AMEEIEG--LELTSPGAALATFQVHCRAFADAGQQDAFTRVVGLVVQPG 228 Paracoccus de...
3TXV_A         232 VEFGNENVIAYDRARAEKLSATLGQLH-GXVFEAHSTDYQTPDALRELVADGFAILKVGPGLTFALREALYGLDQIAAFL 310 Sinorhizobium...
WP_011808974   228 LEFGPDHVQHFDLQAPDSLSEVLAPHP-QLAFEAHSTDYQKPPVFAALARRHFTVLKVGPALTFAYRQAVYALDALATWL 306 Verminephroba...
WP_013253691   239 LEFGSEIVHPYKRRHAEELKQIFSVKA-NLFFEAHSTDYQSSEALGALARDGFAFLKVGPALTFAYREALVGLAYIEQRL 317 Sediminispiro...
jgi:Shel_14550 234 VEFHEFHLDEYNRPRAAETVAAMREEP--LCIEGHSTDYQTQKNLGRMVEDGVAILKVGPALTFALRESLFALENIEREI 311
A9CES6         229 VEFGSDNVVAYDPQAAQSLSAVLDGEP-RLVFEAHSTDYQTEPALAALVRDGYPILKVGPGLTFAYREALYALDMIASEM 307 Agrobacterium...
vbi:Arad_12388 231 VEFGNHNVIVYNRSRIDDLRAVLDAEP-QFVFEAHSTDYQGGKPLRELVEDGFPILKVGPELTFVLREALYALDLIASDL 309
jgi:Oant_0288  231 VEFGNENVVFYNSEKATALSGVLSEMA-QFVFEAHSTDYQPVEALSDLVDDGFTILKVGPGLTFALREALYGLDQIAAFL 309
vbi:Arad_9624  232 VEFGNADVVAYVREAARDLVATLDEMP-QFVFEAHSTDYQSGEALRDLVSDGFAILKVGPWLTFALREALYGLSAIAEIL 310
WP_003619561   230 VEFGNENVIVYDREKAQALSASLDSMPiPILFEAHSTDYQPEKALAALVQDGFAILKVGPGLTFALREALYGLDHIAIEL 309 Komagataeibac...
WP_011751066   229 VEFGNHNVIDYDPAAARDLSAVLAQMP-GVVFEAHSTDYQTRGALTALVRDGFAILKVGPGLTFVLREALYGLDAIAEEL 307 Paracoccus de...
3TXV_A         311 FPAARE--RTLAEVTEAVXREEPANWAKYY-HGSAEEQRLQRHFSYSDRIRYYWPHPKAAAAVDELXSLLDGVAIP-ETL 386 Sinorhizobium...
WP_011808974   307 APQSPR--AALAQVLEQLMQAEPQHWRKHY-SGDARALRLLRHFGYADRVRYYWGQPAAKSAVAQLMQLLAEQPEPlAPL 383 Verminephroba...
WP_013253691   318 H---GRskNRILESLSLIMRRNDKYWRDYYaKGDDTEL----IFSLSDRVRYYWDDPVLVQEVEQLFQSIDIHERVtPGL 390 Sediminispiro...
jgi:Shel_14550 312 YAETPEvwSNYRDTLEKVMMDDPSSWESYY-QGTPNEQRIARAYSFYDRCRYYFAKPEIKAARNKLVENLSGNVIP-HCM 389
A9CES6         308 VGTYGD--RPLARTMEKLMLSAPGDWQGHY-HGDDITLRLQRHYSYSDRIRYYWTRPEALAAVSTLHKALDGKTIP-ETL 383 Agrobacterium...
vbi:Arad_12388 310 LPAYGQ--RPLYSAMEALLIAQPSNWSRHY-HGTDAEKRWLRHYSLSDRIRYYWATPEARDAVGFLFESLEGVTIP-MPL 385
jgi:Oant_0288  310 DKLPEE--ETLRGKMEALLLAEPKNWEKYY-HGDAEELRLQRHFSYSDRIRYYWPHPVATAAVDALLNRLEGRKIP-ETL 385
vbi:Arad_9624  311 VPDAIS--EAVPAAMERIMLSSPEHWLKYY-PGDAHEQYVQRHYSFSDRIRYYWAVPAAQKAVDELMAALQGVTIP-RPL 386
WP_003619561   310 QLETDS--TGLRMCMEKLMLREPEYWQRYY-HGSDQALRIQRHFSYSDRIRYYWTHPDAMAAVSRLFAVLEDVAIP-ETL 385 Komagataeibac...
WP_011751066   308 FPGRRQ--RSLRQATEAVMLEAPGNWDRYY-HGPEAERALQRHFSYSDRIRYYWPQPGAERAVDELFALLDGVELP-ETL 383 Paracoccus de...
3TXV_A         387 ISQFLAG---SYARVRNGEVAPQAKPLALAAVDAVLQDYFAAC 426 Sinorhizobium meliloti
WP_011808974   384 LAQHFADpvlEGAQTLQSQGFAWPQALVLAQIQAALNPYFLAp 426 Verminephrobacter eiseniae
WP_013253691   391 VSQYLPRfsgPHTTSMFLSGLHDPREFVMYAIDAELSRYEQAC 433 Sediminispirochaeta smaragdinae
jgi:Shel_14550 390 LSQFLPI---QYYRVRRGEIRNEAADIIWDHIGDSIDGYLRAT 429
A9CES6         384 LRQYLGE---LPLAAVAGK---EPEEVLVAAVDQVLATYHAAT 420 Agrobacterium fabrum str. C58
vbi:Arad_12388 386 MWQHMP------AAMSFADAPLTPEELVMWRITKSLADYDYGC 422
jgi:Oant_0288  386 ISQYLGT---LYPAVASGEIEATPHALMVEAVRNVVRTYGKAV 425
vbi:Arad_9624  387 ISQHLGH---LESLVADGSVAPQARALLLASVTRVLDIYADAI 426
WP_003619561   386 ISQYLAR---VYPQVMSGQLVPAPRELVIASVQQVLAEYAVAV 425 Komagataeibacter hansenii
WP_011751066   384 IAQYLGG---LYPEVRAGRLPPRARDLALAAVERLAQDYVAAC 423 Paracoccus denitrificans
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