activated carbon metagenome (ID 301005) - BioProject

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Accession: PRJNA301005 ID: 301005

activated carbon metagenome

Ann Arbor Drinking water treatment plant metagenome

Samples were collected from dual media filters at the Drinking Water Treatment Plant in Ann Arbor. More...

Accession	PRJNA301005
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	activated carbon metagenome[Taxonomy ID: 1214127] unclassified sequences; metagenomes; ecological metagenomes; activated carbon metagenome
Publications	Pinto AJ et al., "Metagenomic Evidence for the Presence of Comammox Nitrospira-Like Bacteria in a Drinking Water System.", mSphere, 2016 Jan-Feb;1(1)
Grants	"Elucidating Mechanisms Responsible for the Persistence of Microorganisms in Drinking Water Distribution Systems via DNA Microarray Technology" (Grant ID 0613193, National Science Foundation) "Healthy drinking water" (Grant ID EP/M016811/1, Engineering and Physical Sciences Research Council - UK)
Submission	Registration date: 9-Dec-2015 University of Glasgow
Relevance	Industrial

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10104
WGS master	52
SRA Experiments	4
Publications
PubMed	1
PMC	1
Other datasets
BioSample	56
Assembly	52

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

52
52

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_001464665.1	LNDP00000000	SAMN04254483	Ga0074141	Acidobacteria bacterium Ga0074141
GCA_001464065.1	LNDN00000000	SAMN04254481	Ga0077522	Acidobacteria bacterium Ga0077522
GCA_001464455.1	LNEI00000000	SAMN04254502	Ga0077534	Acidobacteria bacterium Ga0077534
GCA_001464545.1	LNFC00000000	SAMN04254522	Ga0077551	Acidobacteria bacterium Ga0077551
GCA_001464575.1	LNFE00000000	SAMN04254524	Ga0077553	Acidobacteria bacterium Ga0077553
GCA_001464995.1	LNEQ00000000	SAMN04254510	Ga0077541	Actinobacteria bacterium Ga0077541
GCA_001464275.1	LNFL00000000	SAMN04254531	Ga0077560	Actinobacteria bacterium Ga0077560
GCA_001464255.1	LNFD00000000	SAMN04254523	Ga0077552	Actinomycetales bacterium Ga0077552
GCA_001464425.1	LNEK00000000	SAMN04254504	Ga0077535	Alphaproteobacteria bacterium Ga0077535
GCA_001464625.1	LNFJ00000000	SAMN04254529	Ga0077558	Bacteroidia bacterium Ga0077558
GCA_001464715.1	LNDT00000000	SAMN04254487	Ga0074137	Bdellovibrionales bacterium Ga0074137
GCA_001464795.1	LNEB00000000	SAMN04254495	Ga0074139	Bdellovibrionales bacterium Ga0074139
GCA_001464495.1	LNDZ00000000	SAMN04254493	Ga0074130	Betaproteobacteria bacterium Ga0074130
GCA_001464695.1	LNDQ00000000	SAMN04254484	Ga0077523	Betaproteobacteria bacterium Ga0077523
GCA_001464765.1	LNDV00000000	SAMN04254489	Ga0077526	Betaproteobacteria bacterium Ga0077526
GCA_001464815.1	LNDW00000000	SAMN04254490	Ga0077527	Betaproteobacteria bacterium Ga0077527
GCA_001464895.1	LNEE00000000	SAMN04254498	Ga0077532	Betaproteobacteria bacterium Ga0077532
GCA_001464125.1	LNEP00000000	SAMN04254509	Ga0077540	Betaproteobacteria bacterium Ga0077540
GCA_001464035.1	LNEC00000000	SAMN04254496	Ga0074131	Bradyrhizobiaceae bacterium Ga0074131
GCA_001464865.1	LNEG00000000	SAMN04254500	Ga0074133	Burkholderiales bacterium Ga0074133
GCA_001464055.1	LNET00000000	SAMN04254513	Ga0077543	Burkholderiales bacterium Ga0077543
GCA_001464355.1	LNEU00000000	SAMN04254514	Ga0077544	Burkholderiales bacterium Ga0077544
GCA_001464195.1	LNEY00000000	SAMN04254518	Ga0077547	Burkholderiales bacterium Ga0077547
GCA_001464115.1	LNES00000000	SAMN04254512	Ga0074140	Chlamydiae bacterium Ga0074140
GCA_001464155.1	LNEN00000000	SAMN04254507	Ga0077538	Cytophagales bacterium Ga0077538
GCA_001465015.1	LNEO00000000	SAMN04254508	Ga0077539	Deltaproteobacteria bacterium Ga0077539
GCA_001464385.1	LNFB00000000	SAMN04254521	Ga0077550	Deltaproteobacteria bacterium Ga0077550
GCA_001464475.1	LNDX00000000	SAMN04254491	Ga0077528	Flavobacteriaceae bacterium Ga0077528
GCA_001464965.1	LNEJ00000000	SAMN04254503	Ga0074134	Gammaproteobacteria bacterium Ga0074134
GCA_001464935.1	LNEL00000000	SAMN04254505	Ga0077536	Gammaproteobacteria bacterium Ga0077536
GCA_001464585.1	LNFF00000000	SAMN04254525	Ga0077554	Gammaproteobacteria bacterium Ga0077554
GCA_001464045.1	LNEF00000000	SAMN04254499	Ga0074132	Nitrosomonadales bacterium Ga0074132
GCA_001464735.1	LNDU00000000	SAMN04254488	Ga0074138	Nitrospira sp. Ga0074138
GCA_001464525.1	LNDY00000000	SAMN04254492	Ga0077529	Planctomycetaceae bacterium Ga0077529
GCA_001465025.1	LNDO00000000	SAMN04254482	Ga0074129	Pseudomonas sp. Ga0074129
GCA_001464405.1	LNER00000000	SAMN04254511	Ga0074135	Rhizobiales bacterium Ga0074135
GCA_001464755.1	LNDR00000000	SAMN04254485	Ga0077524	Rhizobiales bacterium Ga0077524
GCA_001464835.1	LNDS00000000	SAMN04254486	Ga0077525	Rhizobiales bacterium Ga0077525
GCA_001464855.1	LNEA00000000	SAMN04254494	Ga0077530	Rhizobiales bacterium Ga0077530
GCA_001464955.1	LNEM00000000	SAMN04254506	Ga0077537	Rhizobiales bacterium Ga0077537
GCA_001464335.1	LNEV00000000	SAMN04254515	Ga0077545	Rhizobiales bacterium Ga0077545
GCA_001464215.1	LNEZ00000000	SAMN04254519	Ga0077548	Rhizobiales bacterium Ga0077548
GCA_001464285.1	LNFA00000000	SAMN04254520	Ga0077549	Rhizobiales bacterium Ga0077549
GCA_001464655.1	LNFG00000000	SAMN04254526	Ga0077555	Rhizobiales bacterium Ga0077555
GCA_001464235.1	LNFH00000000	SAMN04254527	Ga0077556	Rhizobiales bacterium Ga0077556
GCA_001464375.1	LNEW00000000	SAMN04254516	Ga0074136	Rhodospirillales bacterium Ga0074136
GCA_001464915.1	LNED00000000	SAMN04254497	Ga0077531	Sphingomonadales bacterium Ga0077531
GCA_001464615.1	LNFI00000000	SAMN04254528	Ga0077557	Sphingomonadales bacterium Ga0077557
GCA_001464315.1	LNFK00000000	SAMN04254530	Ga0077559	Sphingomonadales bacterium Ga0077559
GCA_001464505.1	LNEH00000000	SAMN04254501	Ga0077533	Verrucomicrobia bacterium Ga0077533
GCA_001468985.1	LNFM00000000	SAMN04254537	-	activated carbon metagenome
GCA_001464165.1	LNEX00000000	SAMN04254517	Ga0077546	bacterium Ga0077546

SRA Data Details

Parameter	Value
Data volume, Gbases	76
Data volume, Mbytes	53235

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activated carbon metagenome

Ann Arbor Drinking water treatment plant metagenome

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