3A7S,3IHR


Conserved Protein Domain Family
Peptidase_C12_UCH37_BAP1

?
cd09617: Peptidase_C12_UCH37_BAP1 
Click on image for an interactive view with Cn3D
Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5) and BAP1
This ubiquitin C-terminal hydrolase (UCH) family includes UCH37 (also known as UCH-L5) and BRCA1-associated protein-1 (BAP1). They contain a UCH catalytic domain as well as an additional C-terminal extension which plays a role in protein-protein interactions. UCH37 is responsible for ubiquitin (Ub) isopeptidase activity in the 19S proteasome regulatory complex; it disassembles Lys48-linked poly-ubiquitin from the distal end of the chain. It is also associated with the human Ino80 chromatin-remodeling complex (hINO80) in the nucleus and can be activated through transient association of hINO80 with hRpn13 that is bound to the 19S regulatory particle or the proteasome. UCH37 possibly plays a role in oncogenesis; it competes with Smad ubiquitination regulatory factor 2 (Smurf2, ubiquitin ligase) in binding concurrently to Smad7 in order to deubiquitinate the activated type I transforming growth factor beta (TGF-beta) receptor, thus rescuing it from proteasomal degradation. BAP1 binds to the wild-type BRCA1 RING finger domain, localized in the nucleus. In addition to the UCH catalytic domain, BAP1 contains a UCH37-like domain (ULD), binding domains for BRCA1 and BARD1, which form a tumor suppressor heterodimeric complex, and a binding domain for HCFC1, which interacts with histone-modifying complexes during cell division. The full-length human BRCA1 is a ubiquitin ligase. However, BAP1 does not appear to function in the deubiquitination of autoubiquitinated BRCA1. BAP1 exhibits tumor suppressor activity in cancer cells, and gene mutations have been reported in a small number of breast and lung cancer samples. In metastasis of uveal melanoma, the most common primary cancer of the eye, inactivating somatic mutations have been identified in the gene encoding BAP1 on chromosome 3p21.1. These mutations include several that cause premature protein termination as well as affect its UCH domain, thus implicating loss of BAP1 and suggesting that the BAP1 pathway may be a valuable therapeutic target.
Statistics
?
PSSM-Id: 187738
Aligned: 27 rows
Threshold Bit Score: 272.192
Created: 15-Dec-2010
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
catalytic sitecancer-causing
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic site [active site]
Evidence:
  • Comment:Active site residues include a cysteine

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       #
3A7S_A         8 WCLMESDPGVFTELIKGFGCrgAQVEEIWSle-pENFEKLk-pVHGLIFLFKWqp--gEEPAGSVVQDs-rLDTIFFAKQ 82  human
EFP84801       5 WCLTESDPAIFTILLSELGVsgLQVEELWSld-nQSLEQLk-pVHALIFLFKYvnsdqRDPSKQAGEQqpaPPGTWFAHQ 82  Puccinia gramin...
Q9WUP7         8 WCLMESDPGVFTELIKGFGCrgAQVEEIWSle-pESFEKLk-pVHGLIFLFKWqp--gEEPAGSVVQDs-rLETIFFAKQ 82  house mouse
NP_001089066   8 WCLMESDPGVFTELIKGFGCrgIQVEEIWSle-qEHFVDLq-pVQGLIFLFKWqp--gEEPAGSVVQDs-rLDTIFFAKQ 82  African clawed ...
XP_003148804   7 WCLIESDPGVFTELVRGFGVsgVQVEELYSld-kELFSDLk-pVHGLIFLFKWra--gEEPCGSLVLD---NNRVFFAQQ 79  Loa loa
Q09444         7 WCLIESDPGVFTEMLRGFGVdgLQVEELYSl--dDDKAMTr-pTYGLIFLFKWr---qGDETTGIPSD---KQNIFFAHQ 77  nematode
CBY11337       6 WCLLESDPGVFSALIREFGCsgAQVDEIWSld-aENFEPLg-eVFGLIFLFKWdgkkeTASKGKVVSDm-eHENLFWAQQ 82  Oikopleura dioica
7292743       25 WCLIESDPGVFTEMISGFGCtgAEVEEIWSik-aDAFRHLe-pIHGLIFLFKWl---dDKPAGRVVTD---RSDIFFARQ 96  fruit fly
XP_386538     89 WIELESEPAFFTIILRDLGVqnVKAQEIFTid-qDSLSHLpqpVYGLIFLFQYl---pGMEETNEEQD---ASDVWFANQ 161 Gibberella zeae...
EFQ31791      48 WCEVESEPAFFNAMLRELGVkdVKVQEVFSvdenYVATLPq-pIYGFIFLYQYf---sENYEDDEVVD---SRDLWFANQ 120 Glomerella gram...
Feature 1             #                                                                          
3A7S_A        83 VInNAAATQAIVSVLLNCTHq--dVHLGETLSEFKEFSQSfdAAMKGLALSNSDVIRQVHNSFARqqmfefdtk------ 154 human
EFP84801      83 VItNACATLAILNAVMNIPStsskIQLGQELSQLKEFSVDldSQMTGELLTNSERIRAVHNSFARpdpfqrdep------ 156 Puccinia gramin...
Q9WUP7        83 VInNACATQAIVSVLLNCTHq--dVHLGETLSEFKEFSQSfdAAMKGLALSNSDVIRQVHNSFARqqmfefdtk------ 154 house mouse
NP_001089066  83 VInNACATQAIISILLNTTHn--dVHLGETLSEFKEFTQSfdAAMKGLALSNSEVIRQVHNSFARqqmfefdak------ 154 African clawed ...
XP_003148804  80 VIqNACATQAIINLLLNTKPes-gIALGPILEEFKSFTQNfdPMNRGLCLGNSEPIRKVHNSFSRqhlfeldi------- 151 Loa loa
Q09444        78 TIqNACATQALINLLMNVEDt--dVKLGNILNQYKEFAIDldPNTRGHCLSNSEEIRTVHNSFSRqtlfeldi------- 148 nematode
CBY11337      83 VInNACGTQALISILLNIEGn--kIKLGEELENFQNFTIGidGESKGFALSNAEGIRKVHNSFSKqqlfeleep------ 154 Oikopleura dioica
7292743       97 VIpNACATQALLCLLLNLQHe--dIDLGQTLTDLRNLCQDldPECRGHRLANEEKIRKVHNSFARpelfvvees------ 168 fruit fly
XP_386538    162 TTnNACATVAMLNIVMNAEG----IELGDKLQAFKESTKNlsTALRGHQISKNRFIRTIHNSFTRrmdhlnadlflenes 237 Gibberella zeae...
EFQ31791     121 TTdNACATVAMTNILMNCKD----VDLGTNLQEFKDSTSNvsTPLRGHALASNVFIRSVHNSFTRrmdhlnadlfletea 196 Glomerella gram...
Feature 1                                         #              #                               
3A7S_A       155 ------------------------tsakeedaFHFVSYVPvngRLYELDGLREGPIDLGacn-qddWISAVRPVIEKRIQ 209 human
EFP84801     157 ------------------------kqmstedaYHFITYLPlqgKLYELDGLNGLPVFHGkipegqsWTSLAREVIQNRIN 212 Puccinia gramin...
Q9WUP7       155 ------------------------tpakeedaFHFVSYVPvngRLYELDGLREGPIDLGacn-qddWITAVRPVIEKRIQ 209 house mouse
NP_001089066 155 ------------------------sttkdddaFHFVSYVPvngRLYELDGLKDGPIDLGpck-eddWISAARPVIEKRMQ 209 African clawed ...
XP_003148804 152 ------------------------kapekednYHFITYIPvdgHIYELDGLREAPLDLGairegedWLDAVRPIINARIR 207 Loa loa
Q09444       149 ------------------------kggesednYHFVTYVPignKVYELDGLRELPLEVAefqkeqdWIEAIKPVIQQRMQ 204 nematode
CBY11337     155 ------------------------knqekelpYHFVSFVPvngRLWEIDGLQKGPIDHGeis-csnWIDAARPVLQTRMA 209 Oikopleura dioica
7292743      169 ------------------------tdfieddcYHFVGFMPikgKLFELDGMHEGPIELAdidqqqnWLDVVRPIIEARME 224 fruit fly
XP_386538    238 seakssankrrsapkggkrapprkkktdsdygFHFIAYVPaggYVWELDGLQYKPYRLDpvpssskWTSVAAPQIEARML 317 Gibberella zeae...
EFQ31791     197 adskkms----rrgpakktkktkkqkmdsesgYHFIAYIPangSVWELDGLKTRPVCLGplednvhWANLVCPEIQARMR 272 Glomerella gram...
Feature 1                      
3A7S_A       210 KYsegEIRFNLMAI 223 human
EFP84801     213 TYsstEVHFNLMAV 226 Puccinia graminis f. sp. tritici CRL 75-36-700-3
Q9WUP7       210 KYsegEIRFNLMAI 223 house mouse
NP_001089066 210 KYcegEIRFNLMAI 223 African clawed frog
XP_003148804 208 KYsagEIHFNLMAV 221 Loa loa
Q09444       205 KYsegEITFNLMAL 218 nematode
CBY11337     210 QYqegEVHFNLMAC 223 Oikopleura dioica
7292743      225 RYsvgEIHFNLMAL 238 fruit fly
XP_386538    318 QYeesQLSFNLLAL 331 Gibberella zeae PH-1
EFQ31791     273 QFeesALSFNLLAL 286 Glomerella graminicola M1.001

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap