Conserved Protein Domain Family
PQ-loop

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pfam04193: PQ-loop 
PQ loop repeat
Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localization of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Family members are membrane transporters since two members, cystinosin and PQLC2, transport cystine and cationic amino acids, respectively, across the lysosomal membrane. The 2nd PQ-loop of cystinosin hosts the substrate-coupled H+ binding site underlying its H+ symport mechanism, suggesting that PQ-loop repeats have functional significance. It is thus likely that PQ-loop-containing proteins act as a family of membrane transporters. Some transport cystine and cationic amino acids, respectively, across the lysosomal membrane. Others transport lysine and or arginine across the lysosomal membrane in order to maintain the acidic homoeostasis.
Statistics
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PSSM-Id: 461220
Aligned: 207 rows
Threshold Bit Score: 33.6302
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5NGG5        20 FGQIALNASFLLYSVQFIPQVIHNFRNRQAlSNISILTQFGIFITVLCNIVETIGFGYEWQY 81  Francisella tularensis subsp. tul...
Q20157        37 LSRGLGFAITLGSILLFVPQILKIQAARSA-QGISAASQLLALVGAIGTASYSYRSGFVFSG 97  Caenorhabditis elegans
O75352        42 LSKGLGLGIVAGSLLVKLPQVFKILGAKSA-EGLSLQSVMLELVALTGTMVYSITNNFPFSS 102 human
Q6IQH2        49 ISKGLGIGIILGSVLVKLPQILKLLGAKSA-EGLSFNSVLLELFAITGTMAYSLANSFPFSS 109 zebrafish
CAM37578      39 VSNYLSYAVVVGASILKVPQILKVWQNNKA-AGISLLSLFMELLSYIISTSWGVVRGLPFRD 99 
Q57UD3        22 LATILPYGIVFGSVLLKLPQIVKILRNHSA-DGISIISLVVELMSCVISSSWGIARSLMFKD 82  Trypanosoma brucei
Q4DDX9        32 VADVLPYAVVLGSVLLKFPQILKILQHRSA-DGISLASVYFEMTAYVITTSWGIAQALNFKD 92  Trypanosoma cruzi
A0E5Y5        54 ISRTISILMVAFAIMNQLPQILKIFKSQST-QGISFNSYYTELYLFSFITAYNIYKQTKFIL 114 Paramecium tetraurelia
A0E4V5        58 LSEFISYSIVALSVILKAPQIFKIVQKSKV-TGLSFDSIFFELFVYSFSIAYNVHKGNPWKL 118 Paramecium tetraurelia
XP_001615464  23 LNSVFIYSIIVGSCFTKIPQLTKIVSKKNA-AGISFASVYVEILVATSLIVFSIKEKLAIKL 83  malaria parasite P. vivax
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