Conserved Protein Domain Family
PtrB

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COG1770: PtrB (this model, PSSM-Id:224684 is obsolete and has been replaced by 441376)
Protease II [Amino acid transport and metabolism]
Statistics
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PSSM-Id: 224684
Aligned: 23 rows
Threshold Bit Score: 685.181
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15838080  66 ASAP--LPPDTAKHAHAIKApFGAIRNDNYYWLRDDTR---------TNKAVLSYLNAENAYADKVLEPLKPLQETLYKE 134 Xylella fastidiosa ...
17987648   5 FLRP--LPPHAPKHPASDTR-HGITRTDDYAWLRAENWqevfrdpsvLAPEIRAHLDAENAYQAALMKDTENLQKVLFAE 81  Brucella melitensis
16125188  35 AARP--TPPVAKKVPKTITQ-LGRTRTDDYAWMKDDNWqkvlrdpslIKADVKEHLTAENAYTKAMLAPTEALQAAMFEE 111 Caulobacter crescen...
15596501   1 MPHP--QPPIAR-----R---DAGS--DPYAWLEERD-----------APEVLDYLKAENAYLDSELADQAGLRETLFEE 57  Pseudomonas aerugin...
15892300   1 -----mKPPITDKQNYNFEV-HETTINDDYHWLRDPKWpn------vEDSKILDYLKAENQYTENFFADLQNDKEKIFEE 68  Rickettsia conorii
15604150   1 -----mKPPIANKQNYSFEI-HKQTIKDDYNWLRDPNWpn------vEEDKILDYLKAENKYTENFFLNLKKDKKKIFEE 68  Rickettsia prowazekii
15964738  15 KNLP--AAPVAPKKPVTDTR-HGMTRTDDYAWLRAENWqamfkdpsiLDPEIRRHLEAENTYMNAAMADTKDLQKTLFAE 91  Sinorhizobium meliloti
15600834   1 ------MKLLNVLLLTTSLSvFYTYAETDYQWLRDDSR---------SEPAVKQFLAEHNRKTDHWFAPAKPLVQELVNE 65  Vibrio cholerae
13476349   5 SRFPivSPPTPQKRPVYETH-HGITRTDEYAWLRADNWqemfrdpslLDAGIRAELEAENAYQSKLMADTSDLRKQLFKE 83  Mesorhizobium loti
13475081   2 RNIRl-QPPLPRAESRIRVF-HDDVTIDSYRWFRDRE-----------NPDVGAYLEAENSYTEQATAHLSALKAEIIAE 68  Mesorhizobium loti
15838080 135 IVARIKKDDASVPYRKHGWFYYSRFESGKDYPIHARrkdgsgldaaailAANASGDf--vGEQVLLDVNALAAGKSYFSV 212 Xylella fastidiosa ...
17987648  82 MRGRIKEDDSSVPAKDGPYAYGVSYRTGGEQPYFIR-------------TPRDGGP-----ETILLDGDREGEGKAYFRL 143 Brucella melitensis
16125188 112 MKGRIKQDDASVPAKDGPFEYYTRYDKGAQHPVHAR-------------KPVGGGA-----EEVLLDEEKEAKGKAFYQV 173 Caulobacter crescen...
15596501  58 IRGRIRETDLSLPSPWGPWLYYQRTTAGDEYPRHYRcprpa----dgslAVDEG------AEQLLLDPNQLADG-GFLSL 126 Pseudomonas aerugin...
15892300  69 LKGRVKLDDESVYVKNKDYYYYHRVEENKNYPIYCR---------------KHNNMd--sAEEVILDVNLLAPNSSFTDV 131 Rickettsia conorii
15604150  69 LKGRIKLDDESVYIKKKDYYYYQRVERDKNYPIYCR---------------KHNSIe--aTEEVILDVNLLASKGSFTDI 131 Rickettsia prowazekii
15964738  92 MRGRIKEDNSSVPMKDGPFAYGTSYVTGGEHPRYFR-------------IPREGAAgdetIRRVLLDGDREAEGKTYFRI 158 Sinorhizobium meliloti
15600834  66 WQQTSQHKAPPPALIYANQQYNDIQWNGHRHIVKIG---------------AQG------QIEPLLNLSARAEPFDYYQL 124 Vibrio cholerae
13476349  84 MKGRIKEDDSSVPMKDGPYAYGSSFKLGGEQPRYFR-------------LPREGGT-----EQILLDGDLEAEGKAYFRL 145 Mesorhizobium loti
13475081  69 IEGRQPREYTSPALQVGPFEYFQRREPNLAHPAWWR-------------RPVTGGS-----EEQVLDPNAIPGAEVFYSL 130 Mesorhizobium loti
15838080 213 AHAEVSPNTHLLAWAEDGVGRRQYTVRFKNLETGVLYPDEIHG------------------------------------- 255 Xylella fastidiosa ...
17987648 144 ASADHAPNHNLLIWGYDDKGSEFYKLKVRDLTTMADLEDIVTD------------------------------------- 186 Brucella melitensis
16125188 174 GAASHSPDHKLYAWAVDEQGSEVFRIHVKDLATGALLGEAVDS------------------------------------- 216 Caulobacter crescen...
15596501 127 GAFSISPDQSLLAYSLDTSGDEIYRLFVKDLASGAVQALPFDD------------------------------------- 169 Pseudomonas aerugin...
15892300 132 ATVAMSPDHNLMAYSVNFTGNEQYNIKIYNLKEQKYLPDELGNvqlnldrfrqdefqdkpaertnvrehrrmpqnslvss 211 Rickettsia conorii
15604150 132 GEIAMSPDQNLMAYSVNFTGNEQYNIKIYNIKKQQYLSNEVk-------------------------------------- 173 Rickettsia prowazekii
15964738 159 AGLDHSSDHSRGIWGYDDKGSEYFTLKVRDLSTGEDLEDLLEN------------------------------------- 201 Sinorhizobium meliloti
15600834 125 ASWSLDRSVQSVALAEDTRGDEQFKLTIVRLADRTEQIVSETA------------------------------------- 167 Vibrio cholerae
13476349 146 GGVDHSADHRKLLWAFDDKGSEFYTLRVRDLADGKELADQIPA------------------------------------- 188 Mesorhizobium loti
13475081 131 GVFEPCDDGRYVAFSFDVIGNENYELRVRDMKTGQEVWQGSKK------------------------------------- 173 Mesorhizobium loti
15838080 256 -----ASSSVVWADDNKTLFYIENDPKTlLTKRLKKHVLGTPVSTDVVVYEEHDDSFYMDIERTRDEKYIVVSM---EST 327 Xylella fastidiosa ...
17987648 187 -----TNGGGAWDAKSEGFFYTRLDENH-RPSKVFYHKIGTQQADDKLIYEETDPGFFLGVGGSALDDYIFIDI---HDH 257 Brucella melitensis
16125188 217 -----TTGDFCFSPDGQWLFWTFRDDNG-RPAKIYRRPIKGAAKDDVLIYDEPDEGFFIGVGVSSSEKYVVISC---GNQ 287 Caulobacter crescen...
15596501 170 -----CDGSLTWANDNRTLFFGELDDTH-RPHKLYRHRLGE--AGAELVFEEGDGRFFLHCYRSSSERQLILLL---NSK 238 Pseudomonas aerugin...
15892300 212 drnlaVAPTIIWHEHLNGFFYITINENQ-RWDKVMFHRLGEEVTQDKLIFEVKNPLHFISCKKSASHEYIFINS---GDH 287 Rickettsia conorii
15604150 174 ----dVAPVIIWHARLNGFFYITINENQ-RWDRVIFHSLDRNITQDKLIFEVKNPIHFISCKRSASHEYIFINS---GDH 245 Rickettsia prowazekii
15964738 202 -----TGGGGAWAPDGKSFFYTVLDENH-RPSKIFHHVIGTPQSEDRLVYEEPDAGFFMSVGGSLLDDFIYIDI---HDH 272 Sinorhizobium meliloti
15600834 168 ------STYFAWAADGKSLYYLSDLNG--STQLQRFELETG--QSTR-LAEWRSAEWLFSLYSASNPRYLVVQQ---NNE 233 Vibrio cholerae
13476349 189 -----TGGSGVWDAGNDGFFYTRLDPNH-RPSKVLFHALGQDPGTDRLIYEETDPGFFMNVDGTRDNQWIMIGI---NDH 259 Mesorhizobium loti
13475081 174 ------VAMVAWAADGNTLFFTSERPSRqQCQELVRLNIAT--GISEVVFEESNEQLKVQVRRSDSGAWLFLDVtafSGH 245 Mesorhizobium loti
15838080 328 VSS-------EMRYAPVDLPKG--FVVLARReRDVKYGGDHF----DRRWVIRTNADGaKNYKLVTAPsdaTLRSQWR-- 392 Xylella fastidiosa ...
17987648 258 ETS-------ECWLLPADDPSAepKLVMARK-AGTEYDIAPG----GDVFYILTNADGaKDFKICQAPasapQPENWQ-- 323 Brucella melitensis
16125188 288 ETS-------EALLIPAANPTAkpVVFHPRE-VGLRYEVEHW----NDHWVIRTNADGaVDWKLVTTPetatGKANWK-- 353 Caulobacter crescen...
15596501 239 TTS-------EAWVLDADQPQGtfRCLAPRE-EGHEYYPDHGrldgRGLWLIRSNQAG-INFALYQAEesrpTREHWQ-- 307 Pseudomonas aerugin...
15892300 288 NEN-------EIYVISMQDDSFtpKLVRAAE-NKIFYEIEYN----GDYFYIKTNYKA-KNFHVIKLPvnnFENTSWDdw 354 Rickettsia conorii
15604150 246 NEN-------EIYVISMQDDSFtpKLVRVAE-NKVFYEVEHN----GDFFYIKTNYKA-KNFHIVKVPinnFENANWNd- 311 Rickettsia prowazekii
15964738 273 ETS-------EYRLIPTRDLAAepRIVAVRV-TGLEYSMTEG----GDVFYILTNADGaKDFKIMEAPveapQKENWR-- 338 Sinorhizobium meliloti
15600834 234 NST-------QQRLLDTQTGELmpWLRTTEP--GLEYYADVL----GETLYINSNHQG--AFRLYRQPl--hTKQDWQ-- 294 Vibrio cholerae
13476349 260 ETS-------EYRLLSASDPFAepKVVSARE-TGLQYELEEG----GDVFFILTNADGaKDFKIMTAPasdpVRANWR-- 325 Mesorhizobium loti
13475081 246 SSFpahfgaeEVWCLPADEPGGnwRRIVKRG-NGHEIYAEHW----GDSFLFRVNDAG-PYCRLVCAPiddpSPSSWE-- 317 Mesorhizobium loti
15838080 393 --DWVVHDPAVFIEDFELFDGFTAIQERSQGLERVR-LLKA-------DGQHTD--VAADEPAYSMGLSENSEPDNLWLR 460 Xylella fastidiosa ...
17987648 324 --EIVAEKPGRLILSHSAYKHHLVWIERDNGLPRIViHDRK-------TGEEHA--IAFDEEAYSLGLHGSAEYDTDVIR 392 Brucella melitensis
16125188 354 --DWVAHKPGRLISGTMAYKAWFVRLEKVDALNRVVvT-AQ-------DGAEHA--IAFDEAAYALSLEGGYEYDTDTVR 421 Caulobacter crescen...
15596501 308 --LRVAHDPQRTLEDVSLNAEAVILGLRDGGLPVIEvQPQ----------GLPayrVQLPDAAYSLYVQDSLEFDSPCVR 375 Pseudomonas aerugin...
15892300 355 ddIYIKEEQDKYLKSFNVTNNYLILNYRDQGLPLIKiKRFK-------DLQENT--IYFPDESFQAS-SFSTNFEEDDIR 424 Rickettsia conorii
15604150 312 --IYIQEEQDKYLKSFDVTKNYLILNYRYNGLPLIKiKQFQ-------DQHENI--IHFPDVSFQAN-SFSTNFEEDNIR 379 Rickettsia prowazekii
15964738 339 --EVVPHKPGTLILSHMAYARHLVWLQRRNGLPEIViRDRR-------TGEEHA--IAFAEEAYSLGLAGAAEYGTDIIR 407 Sinorhizobium meliloti
15600834 295 --SVTTHKEIGSLSNFYLFDAGIVLVENQTLAPKVWvLDSQ--------GEVRTh-FELRDLGQVAWISRNGDAVSNRLR 363 Vibrio cholerae
13476349 326 --ELVPHEPGRLILSVIGFKDHMVRLERKEGLPRIVvRDRI-------TGEEHL--LSLDEEAFSLGLSGSYEYDTEIMR 394 Mesorhizobium loti
13475081 318 --EVIPHREGATLEEVHIFEKHLVVLEREGLRPRLVaRDRSgrvgttiDPEESSctLKVGSSAGGTHSVPRHLFRSSKLV 395 Mesorhizobium loti
15838080 461 YTYTSLTTPATTYEFNVRTGERRQLKQQPVIG-YDPSQYVTERLWVTARDGVKVPVSLVYRKG----FKKDGTAALYQYA 535 Xylella fastidiosa ...
17987648 393 FSYSSMTTPEQLFDYNMRTRERTLLKTQEVPSgHNPQDYVTRRILAPAFDGELVPVSLLYHKD----TKLDGSAPCLLYG 468 Brucella melitensis
16125188 422 FVYNSMTTPRQWFDYDMKSRQRTLRKTQEIPSgHDPSKYETRRLNAKAADGAEVPIFVLMKKG----TKLDGSAPLLLYG 497 Caulobacter crescen...
15596501 376 LRYEALNRPAQVRQLNLADGTQTVLKQTPVEGpFDADAYASRRIWASSGDGTQVPVSLVARKEvldgIAAGRPAPLYLYG 455 Pseudomonas aerugin...
15892300 425 IDYSSLARPNTTYSYDFNSDKLTILKSHEIPSgFNPEEYKVERIFAD-NEDVKVPITLFYKKSl---FKKDGSNPLYLMG 500 Rickettsia conorii
15604150 380 IDYSSLARPNTTYSYDFDKNKLTILKDQEIPSgFNPEEYKVERIFAD-NEGVKVPITLFYKKSl---FKKDGSNPLYLIG 455 Rickettsia prowazekii
15964738 408 FSYSSMTTPSQLFDYDMQTRKRTLLKTQEVPSgHDPDDYVTRRVFAPAHDGEQVPVTLLYRKD----TPLDGSAPCLLYG 483 Sinorhizobium meliloti
15600834 364 VRTMSMTEPASWHELDVAQLQWQQLSQDHYAD-FDPKQYQTQTVWVT-QGAIQVPVTLAYRSD-----KLTPNSSVVLYG 436 Vibrio cholerae
13476349 395 FSYSSMTTPAQVFDYNMRTRERALLKTQEVPSgHDADHYVTRRLMAPAADGELVPISLLHHRD----TPLDGSAPCLLYG 470 Mesorhizobium loti
13475081 396 YSISSFVTPDTFVEHDLADDRSVTLCRAHIPG-FDPALYVSQVVMVEADDGVEIPISLVTRRD------RANPGPVVLRV 468 Mesorhizobium loti
15838080 536 YGSYGLSTDPGFN------LPVVSLLDRGVVYAIAHIRGGQEMGRQWYDDGKLLHKQNTFNDFIDVTRALVAQGYAAKGR 609 Xylella fastidiosa ...
17987648 469 YGSYGITIPASFS------TSRLSLVDRGFVYAIAHIRGGKDKGFAWYENGKRDKKTNTFKDFIAAAQHLVKEGFTSHDR 542 Brucella melitensis
16125188 498 YGSYGISMEPNFS------IRNFSLVDRGWIWATACPRGGSEKGWSWFLDGKKFKKKNTFTDFIACAEHLHAAGYGKPAS 571 Caulobacter crescen...
15596501 456 YGAYGHSLDPWFS------HARLSLLERGFVFAIAHVRGGGELGEAWYRAGKLEHKQNSFDDFIACAEHLLAEGYCRPEG 529 Pseudomonas aerugin...
15892300 501 YGAYGIAMPVNFR------NTAVTLADRGFIYAVAHIRGGDDLGHDWYEAAKFLTKKRTFEDFIACSRALINEQYTSNNN 574 Rickettsia conorii
15604150 456 YGAYGITMPVNFR------NIAVTLTNRGFIYAIAHIRGGDDLGHDWYEAAKFLTKKRTFEDFIACSRTLIKEKYTNNNN 529 Rickettsia prowazekii
15964738 484 YGAYGITIPASFN------TNCLSLVDRGFVYAIAHIRGGKDKGFHWYEDGKMAKKTNTFKDFIAAADYLNQEKFTSYAN 557 Sinorhizobium meliloti
15600834 437 YGAYGVTMKPYFMp------QIVSLLDRGMIYAIAHVRGGGYLGEAWHQAGAGLNKQNGIDDFLAAARYLTHFQQGER-A 509 Vibrio cholerae
13476349 471 YGSYGITVPAAFN------TNCLSLVDRGFVYAIAHVRGGKDKGYGWYDDGKRAHKMNTFTDFIACARHLVAERYSAHDR 544 Mesorhizobium loti
13475081 469 YGCYGSPRSPSFKdwpsfmTGRLSLLDRGVAFGWAHIRGGGELGRPSHEAAMAERKRTTHTDLIAAAEGLVKQGFATRDG 548 Mesorhizobium loti
15838080 610 VAAAGGSAGGLLMGVVANQAPSDYRVIVAQVPFVDVVTTMLDPSIPLTTNEYDEWGNPE-QKVYYDYMLTYSPYDNVVH- 687 Xylella fastidiosa ...
17987648 543 IVAHGGSAGGMLMGAIANMAPQAFGGIIAEVPFVDVLNTMLDDTLPLTPPEWPEWGNPIaSEADYRTIASYSPYDNVTA- 621 Brucella melitensis
16125188 572 TVAYGGSAGGLLMGAITNMRPDLFAGIIAAVPFVDVVNTMSDTTLPLTPPEWPEWGNPLeDKEAYDYIASYSPYDNIGP- 650 Caulobacter crescen...
15596501 530 LAISGGSAGGLLIGAVLNQRPQLFGAAIAEVPFVDVLNSMLNPDLPLTVTEYDEWGNPQ-EPEVHARIAAYAPYENVRA- 607 Pseudomonas aerugin...
15892300 575 IVIMGGSAGGMLIGYILNEKPEIYRAAIAHVPFVDVLSTMLDESLPLTLLEYNEWGNPK-EKEYFEYIKSYSPYDNVKA- 652 Rickettsia conorii
15604150 530 IVIAGGSAGGMLIGYVLNEKPEIYRAAIAHVPFVDVLNTMLDENLPLTLLEYNEWGNPK-EQEYFDYIKSYSPYDNVKT- 607 Rickettsia prowazekii
15964738 558 IVAEGGSAGGMLMGAIANMAPEKFRGIIAAVPFVDVLSTMLDDTLPLTPPEWPEWGNPIdSPEFYDIIASYSPYDNVGA- 636 Sinorhizobium meliloti
15600834 510 IYTIGGSAGGTLVAAALNQQPNLFAGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQ-QPEQRQVMQAYDPLSNLRA- 587 Vibrio cholerae
13476349 545 IVAQGGSAGGMLMGAIANMAPDCFGGIVAEVPFVDVLTTMLDATLPLTPPEWPEWGNPIaSADDYRTIAAYSPYDNVAA- 623 Mesorhizobium loti
13475081 549 IAIEGASAGGGVVLATAALRPDLFRAVIAEVPLADILDTEMDAAMPWGLWERAEYGNPH-IANEYRYLLSYDPYYNLSAd 627 Mesorhizobium loti
15838080 688 QAYPALFVGTGLWDSQVQYWEPAKWVAKLRDENTGAL-PIVFRVNMDAGHGGKSGRFRRYQELAESYAFVLHHLEVK 763 Xylella fastidiosa 9a5c
17987648 622 QAYPAILAVAGLTDPRVTYWEPAKWVAKLRELKTDSH-PVLFRINMDAGHAGASGRFSRLEEVAYSFAFALKVVGKV 697 Brucella melitensis
16125188 651 KPYPAILATGGLSDPRVTYWEPQKWVAKLRPATTSGN-PVLLKINMEAGHGGASGRFDFLKEIALDYAFAVWAVEKG 726 Caulobacter crescentus...
15596501 608 QDYPHLLVVAGYNDSRVQYWEAAKWVAKLRATRTDAN-LLLLKTDLGAGHGGMSGRYQGLKDVALEYAFLLKVLGLV 683 Pseudomonas aeruginosa...
15892300 653 QNYPALFVTCGISDPRVGYWEPAKWVAKLRALKMDNN-PLLLKTNMDTGHKGSAGRFDYLKEIADELVFIFKVFDVE 728 Rickettsia conorii
15604150 608 QNYPALFIRCGISDPRVGYWEPAKWVAKLRELKTDNN-PLLLKINMDTGHQGAAGRFDYLQEITDELVFIFKIFDVE 683 Rickettsia prowazekii
15964738 637 RPYPAILALGGLTDPRVTYWEPAKWVAKLREETTGSE-PILLKTNMDAGHGGASGRFQRLEEIAFEYAFAIKVAGRM 712 Sinorhizobium meliloti
15600834 588 APYPPTLVNVGWWDNRVPYWEGARYLARLSDVSQGAG-PYLLSTDFQAGH--ASDRRQALEKQAREYAFFLTLDKTR 661 Vibrio cholerae
13476349 624 LDYPPILALAGLTDPRVTYWEPAKWVARLRDRKSGDN-PVLFKINMDSGHAGASGRFSRLEEIAYTYSFALKVTGKA 699 Mesorhizobium loti
13475081 628 RPLPPTYVDAALDDGQVLYYQPARYVAQRRSCAADRDpKLVFRTRMVGGHSGASHGPGVAEERAFRMAWALDQLRTI 704 Mesorhizobium loti
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