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Items: 11

1.

Gene expression profiles of isogenic single-cell derived clones of BRAF-mutated SK-MEL-5 melanoma cell lines

(Submitter supplied) We recently reported that single-cell derived isogenic subclones of SKMEL5 cells have differential initial sensitivity to BRAF-inhibitors. In order to probe differences among these subclones, we selected three subclones with unique drug responses: progressing (SK-MEL-5 SC10), stationary (SK-MEL-5 SC07), and regressing (SK-MEL-5 SC01) and performed RNASeq. This study examines differentially expressed genes (DEGs) among the subclones to identify the molecular basis for initial differences in drug sensitivity.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21290
9 Samples
Download data: TXT
Series
Accession:
GSE122041
ID:
200122041
2.

Illumina HiSeq 3000 (Homo sapiens)

Platform
Accession:
GPL21290
ID:
100021290
3.

SC10_rep3

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453528
ID:
303453528
4.

SC10_rep2

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453527
ID:
303453527
5.

SC10_rep1

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453526
ID:
303453526
6.

SC07_rep3

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453525
ID:
303453525
7.

SC07_rep2

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453524
ID:
303453524
8.

SC07_rep1

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453523
ID:
303453523
9.

SC01_rep3

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453522
ID:
303453522
10.

SC01_rep2

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453521
ID:
303453521
11.

SC01_rep1

Organism:
Homo sapiens
Source name:
Skin
Platform:
GPL21290
Series:
GSE122041
Download data
Sample
Accession:
GSM3453520
ID:
303453520
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