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Items: 9

1.

Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus [RNA Bind-N-Seq]

(Submitter supplied) The CUG-BP and ETR-3-like factor 1 (Celf1) RNA binding protein plays an important role in heart and muscle development, and is over-expressed in the disease myotonic dystrophy. Celf1 has known roles in regulation of RNA splicing, RNA stability, and protein translation. To identify transcriptome-wide targets of the Celf1 protein, we performed CLIP-seq against Celf1 using the 3B1 antibody, in myoblasts, heart tissue, and muscle tissue.
Organism:
synthetic construct
Type:
Other
Platform:
GPL15228
7 Samples
Download data: XLSX
Series
Accession:
GSE67337
ID:
200067337
2.

Illumina HiSeq 2000 (synthetic construct)

Organism:
synthetic construct
49 Series
1918 Samples
Download data
Platform
Accession:
GPL15228
ID:
100015228
3.

compete_library

Organism:
synthetic construct
Source name:
in vitro library of RNA
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645018
ID:
301645018
4.

Celf1-130nM_Mbnl1-1000nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 1000 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645017
ID:
301645017
5.

Celf1-130nM_Mbnl1-500nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 500 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645016
ID:
301645016
6.

Celf1-130nM_Mbnl1-250nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 250 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645015
ID:
301645015
7.

Celf1-130nM_Mbnl1-130nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 130 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645014
ID:
301645014
8.

Celf1-130nM_Mbnl1-64nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 64 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645013
ID:
301645013
9.

Celf1-130nM_Mbnl1-0nM

Organism:
synthetic construct
Source name:
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 0 nM MBNL1 protein.
Platform:
GPL15228
Series:
GSE61893 GSE67337
Download data
Sample
Accession:
GSM1645012
ID:
301645012
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