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Status |
Public on Apr 13, 2015 |
Title |
Celf1-130nM_Mbnl1-250nM |
Sample type |
SRA |
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Source name |
in vitro library of RNA, pulled down with 130 nM CELF1 protein in the presence of 250 nM MBNL1 protein.
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Organism |
synthetic construct |
Characteristics |
treatment: Celf1-130nM_Mbnl1-250nM
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Extracted molecule |
total RNA |
Extraction protocol |
in vitro library
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Library strategy |
OTHER |
Library source |
transcriptomic |
Library selection |
other |
Instrument model |
Illumina HiSeq 2000 |
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Data processing |
Reads were analyzed for motif enrichment according to Lambert et al, Mol Cell 2014. Genome_build: n/a Supplementary_files_format_and_content: Excel file of hexamer R values for each library.
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Submission date |
Mar 26, 2015 |
Last update date |
May 15, 2019 |
Contact name |
Eric T Wang |
Organization name |
University of Florida
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Street address |
2033 Mowry Rd
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City |
Gainesville |
State/province |
FL |
ZIP/Postal code |
32610 |
Country |
USA |
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Platform ID |
GPL15228 |
Series (2) |
GSE61893 |
Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus |
GSE67337 |
Functional Antagonism Between CELF and Mbnl Proteins in Cytoplasm and Nucleus [RNA Bind-N-Seq] |
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Relations |
BioSample |
SAMN03448760 |
SRA |
SRX970704 |
Supplementary data files not provided |
SRA Run Selector |
Raw data are available in SRA |
Processed data are available on Series record |
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