GEO DataSets

(Submitter supplied) Although the majority of genomic binding sites for the insulator protein CTCF are constitutively occupied, a subset show variable occupancy. Such variable sites provide an opportunity to assess context-specific CTCF functions in gene regulation. Here we have identified a variably occupied CTCF site in the Ultrabithorax (Ubx) gene in Drosophila. This site is occupied in tissues where Ubx is active (third thoracic imaginal leg disc) but is not bound in tissues where the Ubx gene is repressed (first thoracic imaginal leg disc).

Organism:

Drosophila melanogaster

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL15641

4 Samples

Download data: PAIR, SGR, TXT

(Submitter supplied) D. mel ChIP 2.1M WG-T Arr Del Design Name: 100718_DM_5_HX1_Catalog_tiling1 Design Name: 100718_DM_5_HX1_Catalog_tiling2 Design Name: 100718_DM_5_HX1_Catalog_tiling3 Design_ID = 535483 Format: 2.1M Build: UCSC DM3 [corresponds to BDGP/FlyBaseGenBank Release 5] SLIDE_LAYOUT_NAME: NimbleChip_HX1 Protocol: See manufacturer's web site www.nimblegen.com

Organism:

Drosophila melanogaster

15 Series

94 Samples

Download data: GFF, NCD, NDF, POS