GSM616455[Accession] - GEO DataSets

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Items: 4

Select item 2000250931.

Global hypomethylation identifies loci targeted for hypermethylation in head and neck cancer

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL8490
322 Samples

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Series

Accession:: GSE25093

ID:: 200025093

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000250912.

Global hypomethylation identifies loci targeted for hypermethylation in head and neck cancer: blood controls

(Submitter supplied) Genome-wide DNA methylation profiling of head and neck squamous cell carcinomas (HNSCCs). The Illumina Infinium 27k Human DNA methylation BeadChip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in fresh-frozen tumor tissues. Samples included 91 tumors from the oralpharynx and larynx, reflecting all stages of disease, 18 normal head and neck National Disease Research Interchange (NDRI) samples, and 213 normal control blood samples.

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL8490
213 Samples

Download data: TXT

Series

Accession:: GSE25091

ID:: 200025091

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000084903.

Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)

(Submitter supplied) HumanMethylation27 DNA Analysis BeadChip allows researchers to interrogate 27,578 highly informative CpG sites per sample at single-nucleotide resolution. This 12-sample BeadChip features content derived from the well-annotated NCBI CCDS database (Genome Build 36) and is supplemented with more than 1,000 cancer-related genes described in published literature. Probe content has been enriched to deeply cover more than 150 well-established cancer genes known to show differential methylation patterns. more...