GEO DataSets

(Submitter supplied) Over a billion people are infected by Ascaris spp. intestinal parasites. We investigated gene expression by various tissues of adult A. suum, and used that information to help resolve basic functions of these tissues, basic biology of parasitism and functional aspects of nematode genomes. The A. suum genome was sequenced and assembled to allow generation of microarray elements. Expression of over 40,000 60-mer elements was investigated in a variety of tissues from both male and female adult worms. more...

Organism:

Ascaris suum

Type:

Expression profiling by array

Platform:

GPL15336

10 Samples

Download data: FNA, GPR, TXT

(Submitter supplied) Agilent 4x44K format chips were used for this genome-wide expression array. The Agilent gene expression custom array for A. suum was designed in Agilent eArray: 4x44K Design ID 018257 The final array contains 42,212 customized probes, each derived from a single predicted A. suum gene. We also included 1,591 spike control spots of ten probes, each targeting a different Arabidopsis thaliana gene that did not have homology to known non-plant sequences currently in public databases (SpotReport@-10 Array Validation System, Stratagene).

Organism:

Ascaris suum

1 Series

10 Samples

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