GEO DataSets

(Submitter supplied) The expected increase of sustainable energy demand has shifted the attention towards bioenergy crops. Due to their know tolerance against abiotic stress and relatively low supply request, they have been proposed as election crops to be cultivated in marginal lands without disturbing the part of lands employed for agricultural purposes. Arundo donax L. is a promising bioenergy crop whose behaviour under water and salt stress has been recently studied at transcriptomic levels. more...

Organism:

Arundo donax

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25702

12 Samples

Download data: FASTA, XLS

(Submitter supplied) Real-time quantitative PCR (RT–qPCR) is the favoured method for gene expression analysis in molecular biology due to its sensitivity, specificity, cost-effectiveness, and reproducibility. To obtain the accuracy and reliability of RT-qPCR, the use of reliable reference genes is inevitable. There were many reports about the physiological response of giant reed (Arundo donax L.) to abiotic stresses. However, there is little use in the validation of reference genes under different treatments. more...

Organism:

Arundo donax

Type:

Expression profiling by RT-PCR

Platform:

GPL31093

32 Samples

Download data: TXT

(Submitter supplied) Arundo donax L. is one of the most promising bioenergy crop due to its high biomass yield and low irrigation requirement. The resistance to biotic and abiotic stress causes the high invasiveness of this plant, which can grow with very low management input (e.g., pesticides, fertilization, irrigation) even in marginal lands or in fields irrigated with waste or salty water. We report the leaf transcriptome sequencing, de novo assembly and annotation of a giant reed G34 genotype under salt stress. more...

Organism:

Arundo donax

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25702

6 Samples

Download data: TXT

(Submitter supplied) Arundo donax L. is one of the most promising bioenergy crop due to its high biomass yield and low irrigation requirement. The resistance to biotic and abiotic stress causes the high invasiveness of this plant which can grow with very low management input (e.g., pesticides, fertilization, irrigation) even in marginal lands or in fields irrigated with waste or salty water. Despite its economic importance, the A. more...

Organism:

Arundo donax

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25702

9 Samples

Download data: FASTA, TXT

(Submitter supplied) PCR assay Protocol: see manufacturer's website

Organism:

Arundo donax

1 Series

32 Samples

Download data