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Links from GEO DataSets

Items: 19

1.

The evolution of the naked mole-rat T cells

(Submitter supplied) The immune system consists of a network of specialized cells and processes that protect the organism from diseases and regulates tissue repair. Natural killer (NK) cells and the αβ and γδ T cells comprise the cytotoxic arm of the immune system and have evolved to detect and eradicate cells infected with pathogens and affected by malignancies, in order to prevent their spread and subsequent tissue damage. more...
Organism:
Mus musculus; Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
4 related Platforms
66 Samples
Download data: MTX, TSV
Series
Accession:
GSE214390
ID:
200214390
2.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats [unfractionated PB]

(Submitter supplied) Naked mole-rats are a mammalian model organism of exceptional longevity. We mapped the hematopoietic hierarchy and used functional characterizations to define a purified stem and progenitor cell (HSPC) compartment similar to mouse LIN-/Sca-1+/Kit+ HSPCs or human LIN-/CD34+/CD38lo HSPCs.
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL30845
7 Samples
Download data: RDATA
Series
Accession:
GSE202903
ID:
200202903
3.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Heterocephalus glaber; Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL24247 GPL30845
42 Samples
Download data
Series
Accession:
GSE185724
ID:
200185724
4.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats [sorted_BM_PB_THY]

(Submitter supplied) Naked mole-rats are a mammalian model organism of exceptional longevity. We mapped the hematopoietic hierarchy and used functional characterizations to define a purified stem and progenitor cell (HSPC) compartment similar to mouse LIN-/Sca-1+/Kit+ HSPCs or human LIN-/CD34+/CD38lo HSPCs.
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL30845
5 Samples
Download data: RDATA
Series
Accession:
GSE185723
ID:
200185723
5.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats [Xeno]

(Submitter supplied) Naked mole-rats are a mammalian model organism of exceptional longevity. We mapped the hematopoietic hierarchy and used functional characterizations to define a purified stem and progenitor cell (HSPC) compartment similar to mouse LIN-/Sca-1+/Kit+ HSPCs or human LIN-/CD34+/CD38lo HSPCs.
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL30845
8 Samples
Download data: RDATA
Series
Accession:
GSE185722
ID:
200185722
6.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats [unfractionated LY]

(Submitter supplied) Naked mole-rats are a mammalian model organism of exceptional longevity. We mapped the T cell developmental landscape in Naked mole-rats and showed
Organism:
Mus musculus; Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL30845 GPL24247
14 Samples
Download data: RDATA
Series
Accession:
GSE185721
ID:
200185721
7.

Single-cell RNA-Sequencing maps the hematopoietic landscape in naked mole-rats [unfractionated BM]

(Submitter supplied) Naked mole-rats are a mammalian model organism of exceptional longevity. We mapped the hematopoietic hierarchy and used functional characterizations to define a purified stem and progenitor cell (HSPC) compartment similar to mouse LIN-/Sca-1+/Kit+ HSPCs or human LIN-/CD34+/CD38lo HSPCs.
Organism:
Mus musculus; Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL30845 GPL24247
8 Samples
Download data: RDATA
Series
Accession:
GSE185720
ID:
200185720
8.

Transcriptome sequencing of naked mole rat, Heterocephalus glaber

(Submitter supplied) Deep sequencing of mRNA from naked mole rat
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL13793
13 Samples
Download data: BEDGRAPH
Series
Accession:
GSE30337
ID:
200030337
9.

Droplet-based single-cell RNA-sequencing of mouse and naked mole-rat spleen and circulating immune cells, in natural conditions, following lipopolysaccharide (LPS) challanege, and saline control

(Submitter supplied) Single-cell RNA-sequencing was performed in the mouse and naked mole-rat immune systems in order to map and compare their immune cell repertoirs and their cell-specific gene-expression responses to LPS challenge
Organism:
Mus musculus; Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL26775 GPL21103
63 Samples
Download data: CSV
Series
Accession:
GSE132642
ID:
200132642
10.

A2B5 and CD140 sorted cells from human adult or fetal brain samples for comparative species analysis

(Submitter supplied) Cells were isolated from adult or fetal samples, using either A2B5 or CD140 as selection marker.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL16791
8 Samples
Download data: CSV
11.

RNA-seq of breeding and non-breeding naked mole-rats and guinea pigs

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Heterocephalus glaber; Cavia porcellus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL21195 GPL22346
476 Samples
Download data
Series
Accession:
GSE98719
ID:
200098719
12.

RNA-seq of naked mole-rat liver from breeders and non-breeders [livers]

(Submitter supplied) Comparison of gene expression level by Illumina sequencing of naked mole-rat liver from breeders and non-breeders.
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21195
23 Samples
Download data: XLS
Series
Accession:
GSE98667
ID:
200098667
13.

RNA-seq of nine naked mole-rat tissues from breeders and non-breeders

(Submitter supplied) Comparison of gene expression level by Illumina sequencing of nine different naked mole-rat tissue from breeders and non-breeders.
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21195
215 Samples
Download data: XLS
Series
Accession:
GSE98663
ID:
200098663
14.

RNA-seq of ten guinea pig tissues from breeders and non-breeders

(Submitter supplied) Comparison of gene expression level by Illumina sequencing of ten different guinea pig tissue from breeders and non-breeders.
Organism:
Cavia porcellus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL22346
238 Samples
Download data: XLS
Series
Accession:
GSE98653
ID:
200098653
15.

Naked mole rat cells are protected from cellular senescence via Wnt/β-catenin-promoted cholesterol metabolism

(Submitter supplied) The naked mole rat (NMR; Heterocephalus glaber) exhibits cancer resistance and an exceptionally long lifespan of approximately 30 years. The longevity of the NMR is widely debated, as it poses challenges to theories associated with aging, cancer, and redox homeostasis. In the present study, we report unique mechanisms of cholesterol metabolism in NMR cells that could be responsible in part for their anti-senescent properties. more...
Organism:
Heterocephalus glaber
Type:
Expression profiling by high throughput sequencing
Platform:
GPL21195
2 Samples
Download data: CSV
Series
Accession:
GSE147871
ID:
200147871
16.

Increased hyaluronan by naked mole-rat HAS2 extends healthspan in mice

(Submitter supplied) Abundant high molecular weight hyaluronic acid (HMW-HA) contributes to cancer resistance and possibly longevity of the longest-lived rodent, the naked mole-rat1,2. To study whether the benefits of increased HMW-HA could be transferred to other animal species, we generated a transgenic mouse overexpressing naked mole-rat hyaluronic acid synthase 2 gene (nmrHAS2). nmrHAS2 mice showed increase in hyaluronan levels in several tissues, and lower incidence of spontaneous and induced cancer, extended lifespan and improved healthspan. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL24247
144 Samples
Download data: TXT
Series
Accession:
GSE234563
ID:
200234563
17.

Increased hyaluronan by naked mole-rat HAS2 improves healthspan in mice [microbiome]

(Submitter supplied) Abundant high molecular weight hyaluronic acid (HMW-HA) contributes to cancer resistance and possibly longevity of the longest-lived rodent, the naked mole-rat1,2. To study whether the benefits of increased HMW-HA could be transferred to other animal species, we generated a transgenic mouse overexpressing naked mole-rat hyaluronic acid synthase 2 gene (nmrHAS2). nmrHAS2 mice showed increase in hyaluronan levels in several tissues, and lower incidence of spontaneous and induced cancer, extended lifespan and improved healthspan. more...
Organism:
Mus musculus
Type:
Other
Platform:
GPL16417
39 Samples
Download data: TXT
Series
Accession:
GSE234286
ID:
200234286
18.

Increased hyaluronan by naked mole-rat HAS2 extends healthspan in mice

(Submitter supplied) Abundant high molecular weight hyaluronic acid (HMW-HA) contributes to cancer resistance and possibly longevity of the longest-lived rodent, the naked mole-rat1,2. To study whether the benefits of increased HMW-HA could be transferred to other animal species, we generated a transgenic mouse overexpressing naked mole-rat hyaluronic acid synthase 2 gene (nmrHAS2). nmrHAS2 mice showed increase in hyaluronan levels in several tissues, and lower incidence of spontaneous and induced cancer, extended lifespan and improved healthspan. more...
Organism:
Mus musculus; Homo sapiens; Rattus norvegicus
Type:
Expression profiling by array; Methylation profiling by array
Platform:
GPL28271
19 Samples
Download data: IDAT
Series
Accession:
GSE234154
ID:
200234154
19.

Epigenetic aging of the demographically non-aging naked mole-rat [RRBS]

(Submitter supplied) The naked mole-rat (NMR) is an exceptionally long-lived rodent that does not show increased mortality with age, uniquely defining NMR as a demographically non-aging mammal. Here, we performed bisulfite sequencing on over one hundred NMR blood samples differing in age, assessing more than 3 million common CpG sites. We observed an information loss of the NMR methylome during aging suggesting that NMR ages. more...
Organism:
Heterocephalus glaber
Type:
Methylation profiling by high throughput sequencing
Platform:
GPL21195
107 Samples
Download data: COV
Series
Accession:
GSE179039
ID:
200179039
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