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PVALB parvalbumin [ Equus caballus (horse) ]

Gene ID: 100069554, updated on 8-Mar-2024

Summary

Official Symbol
PVALBprovided by VGNC
Official Full Name
parvalbuminprovided by VGNC
Primary source
VGNC:VGNC:22051
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
pvalb1
Orthologs
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Genomic context

Location:
chromosome: 28
Exon count:
7
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 28 NC_009171.3 (35196997..35215434, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 28 NC_009171.2 (34149750..34168169, complement)

Chromosome 28 - NC_009171.3Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene intraflagellar transport 27 Neighboring gene neutrophil cytosolic factor 4 Neighboring gene colony stimulating factor 2 receptor subunit beta

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001159335.1NP_001152807.1  parvalbumin alpha

    See identical proteins and their annotated locations for NP_001152807.1

    Status: PROVISIONAL

    Source sequence(s)
    FM994925
    UniProtKB/TrEMBL
    C1L371
    Conserved Domains (2) summary
    cd00051
    Location:43108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44107
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009171.3 Reference EquCab3.0 Primary Assembly

    Range
    35196997..35215434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005606474.3XP_005606531.1  parvalbumin alpha isoform X1

    UniProtKB/TrEMBL
    F6VNV4
    Conserved Domains (2) summary
    cd00051
    Location:43108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44103
    EF-hand_7; EF-hand domain pair
  2. XM_014736717.2XP_014592203.1  parvalbumin alpha isoform X1

    UniProtKB/TrEMBL
    F6VNV4
    Conserved Domains (2) summary
    cd00051
    Location:43108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44103
    EF-hand_7; EF-hand domain pair
  3. XM_014736718.2XP_014592204.1  parvalbumin alpha isoform X1

    UniProtKB/TrEMBL
    F6VNV4
    Conserved Domains (2) summary
    cd00051
    Location:43108
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:44103
    EF-hand_7; EF-hand domain pair