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AP1M2 adaptor related protein complex 1 subunit mu 2 [ Sus scrofa (pig) ]

Gene ID: 102168166, updated on 10-Mar-2024

Summary

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Official Symbol
AP1M2provided by VGNC
Official Full Name
adaptor related protein complex 1 subunit mu 2provided by VGNC
Primary source
VGNC:VGNC:85381
See related
Ensembl:ENSSSCG00000025838
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 16.9), kidney (RPKM 13.5) and 2 other tissues See more
Orthologs
human mouse all
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Genomic context

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See AP1M2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (69341289..69353906, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (69745781..69752169)

Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene autophagy related 4D cysteine peptidase Neighboring gene KRI1 homolog Neighboring gene cyclin dependent kinase inhibitor 2D Neighboring gene solute carrier family 44 member 2 Neighboring gene 40S ribosomal protein S18 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit mu-2
Names
adaptor related protein complex 1 mu 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

    Range
    69341289..69353906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013987439.2 → XP_013842893.2  AP-1 complex subunit mu-2 isoform X2

    UniProtKB/TrEMBL
    A0A480TRH2
    Related
    ENSSSCP00000022386.2, ENSSSCT00000031515.3
    Conserved Domains (2) summary
    cl02092
    Location:5 → 139
    Clat_adaptor_s; Clathrin adaptor complex small chain
    cl10970
    Location:154 → 421
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  2. XM_021083790.1 → XP_020939449.1  AP-1 complex subunit mu-2 isoform X1

    UniProtKB/TrEMBL
    A0A480TRH2
    Conserved Domains (2) summary
    cl02092
    Location:5 → 139
    Clat_adaptor_s; Clathrin adaptor complex small chain
    cl10970
    Location:154 → 451
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
Nucleotide Protein
Heading Accession and Version

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