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HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102935644, updated on 10-Mar-2024

Summary

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Gene symbol
HNRNPH1
Gene description
heterogeneous nuclear ribonucleoprotein H1
Locus tag
UY3_18225
See related
EnsemblRapid:ENSCMYG00015017455
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (7861084..7885928)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (7861324..7885928)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene calnexin Neighboring gene leukotriene C4 synthase-like Neighboring gene chibby family member 3 Neighboring gene uncharacterized LOC122461362 Neighboring gene RUN and FYVE domain containing 1 Neighboring gene uncharacterized LOC119566901

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein H
Names
Heterogeneous nuclear ribonucleoprotein H
heterogeneous nuclear ribonucleoprotein H1 (H)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    7861084..7885928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007071483.4 → XP_007071545.1  heterogeneous nuclear ribonucleoprotein H isoform X3

    Conserved Domains (4) summary
    pfam08080
    Location:321 → 349
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:76 → 154
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:169 → 258
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:348 → 423
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  2. XM_007071482.4 → XP_007071544.1  heterogeneous nuclear ribonucleoprotein H isoform X2

    Related
    ENSCMYP00015026696.1, ENSCMYT00015032805.1
    Conserved Domains (4) summary
    pfam08080
    Location:321 → 356
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:76 → 154
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:169 → 258
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:355 → 430
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  3. XM_043520653.1 → XP_043376588.1  heterogeneous nuclear ribonucleoprotein H isoform X8

    Related
    ENSCMYP00015026704.1, ENSCMYT00015032813.1
    Conserved Domains (4) summary
    pfam08080
    Location:309 → 337
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:64 → 142
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:157 → 246
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:336 → 411
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  4. XM_037906066.1 → XP_037761994.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    Conserved Domains (4) summary
    pfam08080
    Location:321 → 358
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:76 → 154
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:169 → 258
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:357 → 432
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  5. XM_043520652.1 → XP_043376587.1  heterogeneous nuclear ribonucleoprotein H isoform X7

    Conserved Domains (3) summary
    pfam08080
    Location:321 → 356
    zf-RNPHF; RNPHF zinc finger
    pfam08430
    Location:442 → 510
    Forkhead_N; Forkhead N-terminal region
    cl17169
    Location:355 → 429
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. XM_043520650.1 → XP_043376585.1  heterogeneous nuclear ribonucleoprotein H isoform X4

    Conserved Domains (4) summary
    pfam08080
    Location:309 → 346
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:64 → 142
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:157 → 246
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:345 → 420
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  7. XM_043520651.1 → XP_043376586.1  heterogeneous nuclear ribonucleoprotein H isoform X5

    Conserved Domains (4) summary
    pfam08080
    Location:309 → 344
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:64 → 142
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:157 → 246
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:343 → 418
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  8. XM_037906069.1 → XP_037761997.1  heterogeneous nuclear ribonucleoprotein H isoform X15

    Conserved Domains (4) summary
    pfam08080
    Location:284 → 321
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:39 → 117
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:132 → 221
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:320 → 395
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  9. XM_037906068.2 → XP_037761996.1  heterogeneous nuclear ribonucleoprotein H isoform X6

    Conserved Domains (4) summary
    pfam08080
    Location:321 → 358
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:76 → 154
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:169 → 258
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:357 → 432
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  10. XM_043520655.1 → XP_043376590.1  heterogeneous nuclear ribonucleoprotein H isoform X10

    Conserved Domains (3) summary
    pfam08080
    Location:321 → 349
    zf-RNPHF; RNPHF zinc finger
    pfam08430
    Location:435 → 503
    Forkhead_N; Forkhead N-terminal region
    cl17169
    Location:348 → 422
    RRM_SF; RNA recognition motif (RRM) superfamily

  11. XM_043520657.1 → XP_043376592.1  heterogeneous nuclear ribonucleoprotein H isoform X12

    Conserved Domains (3) summary
    pfam08080
    Location:309 → 346
    zf-RNPHF; RNPHF zinc finger
    pfam08430
    Location:432 → 500
    Forkhead_N; Forkhead N-terminal region
    cl17169
    Location:345 → 419
    RRM_SF; RNA recognition motif (RRM) superfamily

  12. XM_043520658.1 → XP_043376593.1  heterogeneous nuclear ribonucleoprotein H isoform X13

    Conserved Domains (3) summary
    pfam08080
    Location:309 → 344
    zf-RNPHF; RNPHF zinc finger
    pfam08430
    Location:430 → 498
    Forkhead_N; Forkhead N-terminal region
    cl17169
    Location:343 → 417
    RRM_SF; RNA recognition motif (RRM) superfamily

  13. XM_043520660.1 → XP_043376595.1  heterogeneous nuclear ribonucleoprotein H isoform X16

    UniProtKB/TrEMBL
    M7AY22
    Conserved Domains (4) summary
    pfam08080
    Location:309 → 337
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:64 → 142
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:157 → 246
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:336 → 411
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  14. XM_043520662.1 → XP_043376597.1  heterogeneous nuclear ribonucleoprotein H isoform X18

    Related
    ENSCMYP00015026700.1, ENSCMYT00015032808.1
    Conserved Domains (4) summary
    pfam08080
    Location:284 → 312
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:39 → 117
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:132 → 221
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:311 → 386
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  15. XM_043520661.1 → XP_043376596.1  heterogeneous nuclear ribonucleoprotein H isoform X17

    Conserved Domains (4) summary
    pfam08080
    Location:284 → 319
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:39 → 117
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:132 → 221
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:318 → 393
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  16. XM_043520664.1 → XP_043376599.1  heterogeneous nuclear ribonucleoprotein H isoform X21

    Conserved Domains (2) summary
    pfam08080
    Location:284 → 319
    zf-RNPHF; RNPHF zinc finger
    cl17169
    Location:318 → 392
    RRM_SF; RNA recognition motif (RRM) superfamily

  17. XM_043520654.1 → XP_043376589.1  heterogeneous nuclear ribonucleoprotein H isoform X9

    Conserved Domains (4) summary
    pfam08080
    Location:296 → 333
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:51 → 129
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:144 → 233
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:332 → 407
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  18. XM_043520656.1 → XP_043376591.1  heterogeneous nuclear ribonucleoprotein H isoform X11

    Conserved Domains (2) summary
    pfam08080
    Location:296 → 331
    zf-RNPHF; RNPHF zinc finger
    cl17169
    Location:330 → 404
    RRM_SF; RNA recognition motif (RRM) superfamily

  19. XM_043520666.1 → XP_043376601.1  heterogeneous nuclear ribonucleoprotein H isoform X23

    Related
    ENSCMYP00015026691.1, ENSCMYT00015032799.1
    Conserved Domains (2) summary
    pfam08080
    Location:284 → 312
    zf-RNPHF; RNPHF zinc finger
    cl17169
    Location:311 → 385
    RRM_SF; RNA recognition motif (RRM) superfamily

  20. XM_043520659.1 → XP_043376594.1  heterogeneous nuclear ribonucleoprotein H isoform X14

    Conserved Domains (2) summary
    pfam08080
    Location:296 → 324
    zf-RNPHF; RNPHF zinc finger
    cl17169
    Location:323 → 397
    RRM_SF; RNA recognition motif (RRM) superfamily

  21. XM_037906070.2 → XP_037761998.1  heterogeneous nuclear ribonucleoprotein H isoform X19

    Conserved Domains (4) summary
    pfam08080
    Location:269 → 306
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:24 → 102
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:117 → 206
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:305 → 380
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  22. XM_043520663.1 → XP_043376598.1  heterogeneous nuclear ribonucleoprotein H isoform X20

    Conserved Domains (2) summary
    pfam08080
    Location:269 → 304
    zf-RNPHF; RNPHF zinc finger
    cl17169
    Location:303 → 377
    RRM_SF; RNA recognition motif (RRM) superfamily

  23. XM_043520665.1 → XP_043376600.1  heterogeneous nuclear ribonucleoprotein H isoform X22

    Related
    ENSCMYP00015026686.1, ENSCMYT00015032795.1
    Conserved Domains (4) summary
    pfam08080
    Location:269 → 297
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:24 → 102
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:117 → 206
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:296 → 371
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
Nucleotide Protein
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