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FBXW9 F-box and WD repeat domain containing 9 [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116883126, updated on 18-Mar-2024

Summary

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Gene symbol
FBXW9
Gene description
F-box and WD repeat domain containing 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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See FBXW9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022631082.1 (6547876..6553102, complement)

NW_022631082.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 83 Neighboring gene deoxyhypusine synthase Neighboring gene G protein subunit gamma 14 Neighboring gene transportin 2 Neighboring gene small nucleolar RNA SNORD41 Neighboring gene uncharacterized LOC116883135 Neighboring gene telomerase RNA component interacting RNase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022631082 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022631082.1 Reference GSC_riverotter_1.0

    Range
    6547876..6553102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032884113.1 → XP_032740004.1  F-box/WD repeat-containing protein 9 isoform X4

    Conserved Domains (2) summary
    sd00039
    Location:177 → 224
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:171 → 413
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_032884112.1 → XP_032740003.1  F-box/WD repeat-containing protein 9 isoform X3

    Conserved Domains (2) summary
    sd00039
    Location:177 → 224
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:171 → 413
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_032884110.1 → XP_032740001.1  F-box/WD repeat-containing protein 9 isoform X2

    Conserved Domains (2) summary
    sd00039
    Location:177 → 224
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:171 → 443
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_032884109.1 → XP_032740000.1  F-box/WD repeat-containing protein 9 isoform X1

    Conserved Domains (2) summary
    sd00039
    Location:177 → 224
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:171 → 443
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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