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WDR83 WD repeat domain 83 [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116883128, updated on 18-Mar-2024

Summary

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Gene symbol
WDR83
Gene description
WD repeat domain 83
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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See WDR83 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022631082.1 (6535360..6539421)

NW_022631082.1Genomic Context describing neighboring genes Neighboring gene mannosidase alpha class 2B member 1 Neighboring gene WD repeat domain 83 opposite strand Neighboring gene deoxyhypusine synthase Neighboring gene G protein subunit gamma 14 Neighboring gene F-box and WD repeat domain containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022631082 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat domain-containing protein 83

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022631082.1 Reference GSC_riverotter_1.0

    Range
    6535360..6539421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032884116.1 → XP_032740007.1  WD repeat domain-containing protein 83

    Conserved Domains (2) summary
    cd00200
    Location:18 → 295
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:30 → 65
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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