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aspg asparaginase homolog (S. cerevisiae) [ Morone saxatilis (striped sea-bass) ]

Gene ID: 118336951, updated on 20-Mar-2024

Summary

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Gene symbol
aspg
Gene description
asparaginase homolog (S. cerevisiae)
Gene type
protein coding
RefSeq status
MODEL
Organism
Morone saxatilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Moronidae; Morone
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current NCSU_SB_2.0 (GCF_004916995.1) Unplaced Scaffold NW_023339873.1 (13450779..13463835, complement)

NW_023339873.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 123 homolog (S. cerevisiae) Neighboring gene kinesin family member 26Ab Neighboring gene ADP-ribosylation factor 6b Neighboring gene valosin containing protein lysine (K) methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023339873 Unplaced Scaffold Reference NCSU_SB_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome annotation and marker discovery in white bass (Morone chrysops) and striped bass (Morone saxatilis). Li C, et al. Anim Genet, 2014 Dec. PMID 25160849

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60 kDa lysophospholipase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Morone saxatilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NCSU_SB_2.0 Primary Assembly

Genomic

  1. NW_023339873.1 Reference NCSU_SB_2.0 Primary Assembly

    Range
    13450779..13463835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035673723.1 → XP_035529616.1  60 kDa lysophospholipase isoform X2

    Conserved Domains (3) summary
    PLN03192
    Location:459 → 606
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:455 → 483
    ANK; ANK repeat [structural motif]
    cl00216
    Location:56 → 414
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  2. XM_035673722.1 → XP_035529615.1  60 kDa lysophospholipase isoform X1

    Conserved Domains (3) summary
    PLN03192
    Location:471 → 618
    PLN03192; Voltage-dependent potassium channel; Provisional
    sd00045
    Location:467 → 495
    ANK; ANK repeat [structural motif]
    cl00216
    Location:56 → 426
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes
Nucleotide Protein
Heading Accession and Version

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