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TRNP1 TMF1 regulated nuclear protein 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 119563999, updated on 21-Mar-2024

Summary

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Gene symbol
TRNP1
Gene description
TMF1 regulated nuclear protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
1
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 19 NC_051259.2 (10268651..10269237)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 19 NC_051259.1 (9500315..9500834, complement)

Chromosome 19 - NC_051259.2Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 0 group B member 2 Neighboring gene nuclear distribution C, dynein complex regulator Neighboring gene keratinocyte differentiation factor 1 Neighboring gene terminal nucleotidyltransferase 5B Neighboring gene solute carrier family 9 member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TMF-regulated nuclear protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051259.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    10268651..10269237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037882051.2 → XP_037737979.1  TMF-regulated nuclear protein 1

    Conserved Domains (1) summary
    COG5074
    Location:31 → 106
    COG5074; t-SNARE complex subunit, syntaxin [Intracellular trafficking, secretion, and vesicular transport]
Nucleotide Protein
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