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AP1M2 adaptor related protein complex 1 subunit mu 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 119564805, updated on 21-Mar-2024

Summary

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Gene symbol
AP1M2
Gene description
adaptor related protein complex 1 subunit mu 2
See related
EnsemblRapid:ENSCMYG00015011024
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See AP1M2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 20 NC_051260.2 (17438624..17453005)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 22 Unlocalized Scaffold NW_023618336.1 (1453056..1460353, complement)

Chromosome 20 - NC_051260.2Genomic Context describing neighboring genes Neighboring gene interleukin enhancer binding factor 3 Neighboring gene uncharacterized LOC122463403 Neighboring gene solute carrier family 44 member 2 (CTL2 blood group) Neighboring gene uncharacterized LOC119564821 Neighboring gene uncharacterized LOC122463404 Neighboring gene cyclin dependent kinase inhibitor 2D Neighboring gene KRI1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit mu-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051260.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    17438624..17453005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043533036.1 → XP_043388971.1  AP-1 complex subunit mu-2 isoform X2

    Conserved Domains (2) summary
    cd14835
    Location:1 → 116
    AP1_Mu_N; AP-1 complex subunit mu N-terminal domain
    cl10970
    Location:128 → 395
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  2. XM_043533035.1 → XP_043388970.1  AP-1 complex subunit mu-2 isoform X2

    Related
    ENSCMYP00015017129.1, ENSCMYT00015020735.1
    Conserved Domains (2) summary
    cd14835
    Location:1 → 116
    AP1_Mu_N; AP-1 complex subunit mu N-terminal domain
    cl10970
    Location:128 → 395
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)

  3. XM_037888023.2 → XP_037743951.2  AP-1 complex subunit mu-2 isoform X1

    Related
    ENSCMYP00015017118.1, ENSCMYT00015020724.1
    Conserved Domains (2) summary
    cd14835
    Location:47 → 185
    AP1_Mu_N; AP-1 complex subunit mu N-terminal domain
    cl10970
    Location:197 → 464
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
Nucleotide Protein
Heading Accession and Version

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