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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120398355, updated on 21-Mar-2024

Summary

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Gene symbol
ATP6V1C1
Gene description
ATPase H+ transporting V1 subunit C1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See ATP6V1C1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (252046135..252107465)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 10 Neighboring gene antizyme inhibitor 1 Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene frizzled class receptor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Using genes as characters and a parsimony analysis to explore the phylogenetic position of turtles. Lu B, et al. PLoS One, 2013. PMID 24278129, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    252046135..252107465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039525718.1 → XP_039381652.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_039525717.1 → XP_039381651.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_039525716.1 → XP_039381650.1  V-type proton ATPase subunit C 1 isoform X1

    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_039525719.1 → XP_039381653.1  V-type proton ATPase subunit C 1 isoform X2

    Conserved Domains (2) summary
    cd14785
    Location:46 → 72
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:1 → 295
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
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