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aspg asparaginase homolog (S. cerevisiae) [ Thunnus albacares (yellowfin tuna) ]

Gene ID: 122998236, updated on 22-Mar-2024

Summary

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Gene symbol
aspg
Gene description
asparaginase homolog (S. cerevisiae)
See related
EnsemblRapid:ENSTABG00005021791
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus albacares
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
18
Annotation release Status Assembly Chr Location
100 current fThuAlb1.1 (GCF_914725855.1) 15 NC_058120.1 (13540262..13555197)

Chromosome 15 - NC_058120.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122998238 Neighboring gene uncharacterized LOC122998239 Neighboring gene kinesin family member 26Ab Neighboring gene uncharacterized LOC122998761

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058120.1 Chromosome 15 Reference fThuAlb1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas. Ciezarek AG, et al. Genome Biol Evol, 2016 Oct 5. PMID 27614233, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60 kDa lysophospholipase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuAlb1.1

Genomic

  1. NC_058120.1 Reference fThuAlb1.1

    Range
    13540262..13555197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044375009.1 → XP_044230944.1  60 kDa lysophospholipase isoform X1

    Related
    ENSTABP00005054428.1, ENSTABT00005055607.1
    Conserved Domains (4) summary
    PTZ00322
    Location:458 → 546
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:491 → 629
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:493 → 524
    ANK; ANK repeat [structural motif]
    cl00216
    Location:53 → 421
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  2. XM_044375011.1 → XP_044230946.1  60 kDa lysophospholipase isoform X3

    Related
    ENSTABP00005054433.1, ENSTABT00005055612.1
    Conserved Domains (4) summary
    PTZ00322
    Location:458 → 546
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:491 → 631
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:493 → 524
    ANK; ANK repeat [structural motif]
    cl00216
    Location:53 → 421
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes

  3. XM_044375010.1 → XP_044230945.1  60 kDa lysophospholipase isoform X2

    Related
    ENSTABP00005054430.1, ENSTABT00005055609.1
    Conserved Domains (4) summary
    PTZ00322
    Location:446 → 534
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:479 → 617
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:481 → 512
    ANK; ANK repeat [structural motif]
    cl00216
    Location:53 → 409
    L-asparaginase_like; Bacterial L-asparaginases and related enzymes
Nucleotide Protein
Heading Accession and Version

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