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LINC03061 long intergenic non-protein coding RNA 3061 [ Homo sapiens (human) ]

Gene ID: 127379752, updated on 10-Oct-2023

Summary

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Official Symbol
LINC03061provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 3061provided by HGNC
Primary source
HGNC:HGNC:56368
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q33.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (109265487..109271075)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (108492941..108498543)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene myosin XVI Neighboring gene uncharacterized LOC124903207 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:109841281-109841780 Neighboring gene MYO16 antisense RNA 1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr13:109863465-109864664 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:109919619-109920577 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:109923095-109923823 Neighboring gene uncharacterized LOC130494219 Neighboring gene long intergenic non-protein coding RNA 370

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a RNA-Seq based prognostic signature with five lncRNAs for lung squamous cell carcinoma. Tang RX, et al. Oncotarget, 2017 Aug 1. PMID 28881601, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

General gene information

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Clone Names

  • AL161431.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_185883.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL161431

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    109265487..109271075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    108492941..108498543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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