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cwf-19L2 CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 176034, updated on 12-Jun-2024

Summary

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Gene symbol
cwf-19L2
Gene description
CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein
Locus tag
CELE_B0361.2
See related
AllianceGenome:WB:WBGene00015156
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Orthologous to human CWF19L2 (CWF19 like cell cycle control factor 2). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See cwf-19L2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
10
Sequence:
Chromosome: III; NC_003281.10 (7293634..7308355)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene ACB domain-containing protein Neighboring gene LsmAD domain-containing protein;ZM domain-containing protein Neighboring gene Cation efflux protein cytoplasmic domain-containing protein Neighboring gene DUF19 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  2. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of post-mRNA release spliceosomal complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
CWF19-like protein 2 homolog;Cwf19-like protein C-terminal domain-containing protein
NP_001021125.1
  • Confirmed by transcript evidence
NP_001021126.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7293634..7308355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001025954.7 → NP_001021125.1  CWF19-like protein 2 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021125.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q10945, Q10946
    Conserved Domains (2) summary
    pfam04676
    Location:359 → 451
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    pfam04677
    Location:226 → 350
    CwfJ_C_1; Protein similar to CwfJ C-terminus 1

  2. NM_001025955.5 → NP_001021126.1  Cwf19-like protein C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021126.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4TTD1
    Conserved Domains (1) summary
    pfam04676
    Location:2 → 90
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q10946.2

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