U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZK688.9 TIP41-like protein [ Caenorhabditis elegans ]

Gene ID: 176106, updated on 12-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
ZK688.9
Gene description
TIP41-like protein
Locus tag
CELE_ZK688.9
See related
AllianceGenome:WB:WBGene00022803
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in TOR signaling and regulation of phosphoprotein phosphatase activity. Predicted to be active in cytosol. Orthologous to human TIPRL (TOR signaling pathway regulator). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ZK688.9 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (7881113..7883000, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Acetylcholine receptor-like protein cup-4 Neighboring gene Putative tyrosinase-like protein tyr-1 Neighboring gene Iodotyrosine dehalogenase 1 homolog Neighboring gene Transmembrane protein Neighboring gene Ubiquitin-like domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in TOR signaling IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of phosphoprotein phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in regulation of phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
TIP41-like protein
NP_498713.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    7881113..7883000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066312.8 → NP_498713.3  TIP41-like protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498713.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34274, Q27GV5, Q95PW4
    Conserved Domains (1) summary
    pfam04176
    Location:87 → 239
    TIP41; TIP41-like family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34274.3

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Tools