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OSTF1 osteoclast stimulating factor 1 [ Bos taurus (cattle) ]

Gene ID: 281961, updated on 6-Jun-2024

Summary

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Official Symbol
OSTF1provided by VGNC
Official Full Name
osteoclast stimulating factor 1provided by VGNC
Primary source
VGNC:VGNC:32479
See related
BGD:BT26612; Ensembl:ENSBTAG00000002746
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See OSTF1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (51153901..51215016)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene chromosome 8 C9orf40 homolog Neighboring gene carnosine N-methyltransferase 1 Neighboring gene nicotinamide riboside kinase 1 Neighboring gene high mobility group protein B1-like Neighboring gene proprotein convertase subtilisin/kexin type 5 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC137137

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
osteoclast-stimulating factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174409.2 → NP_776834.1  osteoclast-stimulating factor 1

    See identical proteins and their annotated locations for NP_776834.1

    Status: PROVISIONAL

    Source sequence(s)
    AF523267
    UniProtKB/Swiss-Prot
    Q8MJ50
    UniProtKB/TrEMBL
    A0AAA9SC68
    Related
    ENSBTAP00000003560.4, ENSBTAT00000003560.6
    Conserved Domains (3) summary
    cd11772
    Location:16 → 68
    SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
    cd00204
    Location:75 → 189
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:76 → 103
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    51153901..51215016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005210040.5 → XP_005210097.1  osteoclast-stimulating factor 1 isoform X1

    See identical proteins and their annotated locations for XP_005210097.1

    UniProtKB/TrEMBL
    A0A3Q1NJX5, A0AAA9RW27
    Related
    ENSBTAP00000077609.1, ENSBTAT00000102094.1
    Conserved Domains (3) summary
    cd11772
    Location:16 → 68
    SH3_OSTF1; Src Homology 3 domain of metazoan osteoclast stimulating factor 1
    cd00204
    Location:75 → 189
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:76 → 103
    ANK; ANK repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MJ50.1 GenPept UniProtKB/Swiss-Prot:Q8MJ50

Gene LinkOut

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