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zgc:77056 zgc:77056 [ Danio rerio (zebrafish) ]

Gene ID: 327040, updated on 27-Mar-2024

Summary

Official Symbol
zgc:77056provided by ZNC
Official Full Name
zgc:77056provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5248
See related
Ensembl:ENSDARG00000029615 AllianceGenome:ZFIN:ZDB-GENE-030131-5248
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fa20b03; wu:fa20b03
Summary
Orthologous to human KIAA1143 (KIAA1143). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See zgc:77056 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (39242300..39246079)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (39292268..39296047)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 3a Neighboring gene transmembrane protein 42a Neighboring gene glycerol-3-phosphate dehydrogenase 1 like Neighboring gene oxysterol binding protein-like 10b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein KIAA1143 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212698.2NP_997863.2  uncharacterized protein KIAA1143 homolog

    Status: VALIDATED

    Source sequence(s)
    BC066704, CO925251
    UniProtKB/TrEMBL
    A0A8M1PHK9, F1Q4N6
    Related
    ENSDARP00000093286.4, ENSDART00000102510.6
    Conserved Domains (1) summary
    pfam15377
    Location:6142
    DUF4604; Domain of unknown function (DUF4604)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    39242300..39246079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)