U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

grna.2 granulin a, tandem duplicate 2 [ Danio rerio (zebrafish) ]

Gene ID: 336575, updated on 27-Mar-2024

Summary

Official Symbol
grna.2provided by ZNC
Official Full Name
granulin a, tandem duplicate 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-264
See related
Ensembl:ENSDARG00000088641 AllianceGenome:ZFIN:ZDB-GENE-050522-264
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
grn2; wu:fb14a12; zgc:111860
Summary
Predicted to be active in extracellular region. Is expressed in brain; digestive system; gill; pharyngeal arch; and pleuroperitoneal region. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See grna.2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (40196462..40199102, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (40609342..40611982, complement)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 48 Neighboring gene granulin a, tandem duplicate 1 Neighboring gene calaxin Neighboring gene granulin antisense Neighboring gene cyclin dependent kinase 6 Neighboring gene family with sequence similarity 133 member B

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212756.2NP_997921.1  granulin 2 precursor

    See identical proteins and their annotated locations for NP_997921.1

    Status: VALIDATED

    Source sequence(s)
    BC095576, BX510986, EH456557
    UniProtKB/TrEMBL
    A0A8N1Z3P0, Q502S6, Q90ZC9
    Related
    ENSDARP00000051969.4, ENSDART00000051970.5
    Conserved Domains (1) summary
    smart00277
    Location:3989
    GRAN; Granulin

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    40196462..40199102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)