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CG18480 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 34920, updated on 10-May-2024

Summary

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Official Symbol
CG18480provided by FlyBase
Primary source
FLYBASE:FBgn0028518
Locus tag
Dmel_CG18480
See related
AllianceGenome:FB:FBgn0028518
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LP11031; BG:DS07108.4; CT42128; Dmel\CG18480
Orthologs
all
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Genomic context

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See CG18480 in Genome Data Viewer
Location:
35D3-35D3; 2-51 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15630002..15634987)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15630002..15634987)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Odorant receptor 35a Neighboring gene uncharacterized protein Neighboring gene stolid Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GATA factors participate in tissue-specific immune responses in Drosophila larvae. Senger K, et al. Proc Natl Acad Sci U S A, 2006 Oct 24. PMID 17032752, Free PMC Article
  2. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
  3. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
  4. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Ashburner M, et al. Genetics, 1999 Sep. PMID 10471707, Free PMC Article
  5. An expanded toolkit for Drosophila gene tagging using synthesized homology donor constructs for CRISPR-mediated homologous recombination. Kanca O, et al. Elife, 2022 Jun 20. PMID 35723254, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein
Names
CG18480-PA
CG18480-PB
CG18480-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    15630002..15634987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001299031.1 → NP_001285960.1  uncharacterized protein Dmel_CG18480, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285960.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJN8
    Conserved Domains (3) summary
    cd00116
    Location:76 → 230
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:76 → 99
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:74 → 134
    LRR_8; Leucine rich repeat

  2. NM_001299032.1 → NP_001285961.1  uncharacterized protein Dmel_CG18480, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285961.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJN8
    Conserved Domains (3) summary
    cd00116
    Location:76 → 230
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:76 → 99
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:74 → 134
    LRR_8; Leucine rich repeat

  3. NM_135917.4 → NP_609761.1  uncharacterized protein Dmel_CG18480, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609761.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VJN8
    Related
    FBpp0080314
    Conserved Domains (3) summary
    cd00116
    Location:76 → 230
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:76 → 99
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:74 → 134
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95R94 Q95R94
Q9VJN8 Q9VJN8

Gene LinkOut

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