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RPS10P11 ribosomal protein S10 pseudogene 11 [ Homo sapiens (human) ]

Gene ID: 391833, updated on 17-Jun-2024

Summary

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Official Symbol
RPS10P11provided by HGNC
Official Full Name
ribosomal protein S10 pseudogene 11provided by HGNC
Primary source
HGNC:HGNC:36775
See related
Ensembl:ENSG00000243648 AllianceGenome:HGNC:36775
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS10_6_615
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Genomic context

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See RPS10P11 in Genome Data Viewer
Location:
5q31.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (134422828..134423290)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (134946652..134947114)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (133758519..133758981)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase like 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23143 Neighboring gene ubiquitin conjugating enzyme E2 B Neighboring gene CDKN2A interacting protein N-terminal like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133746964-133747702 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133747703-133748440 Neighboring gene MPRA-validated peak5476 silencer Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr5:133771909-133773108 Neighboring gene long intergenic non-protein coding RNA 2999 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133774131-133774646 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133774647-133775160 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:133787376-133787561 Neighboring gene RNA, U6 small nuclear 456, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. Elzi DJ, et al. J Proteome Res, 2014 Aug 1. PMID 24999758, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010811.2 

    Range
    101..563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    134422828..134423290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    134946652..134947114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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