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ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 [ Gallus gallus (chicken) ]

Gene ID: 418479, updated on 9-Mar-2024

Summary

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Symbol
ADAMTS1provided by CGNC
Full Name
ADAM metallopeptidase with thrombospondin type 1 motif 1provided by CGNC
Primary source
CGNC:50780
See related
Ensembl:ENSGALG00010010659
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ADAMTS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (103129744..103137062, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (103217651..103224976, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein Neighboring gene cysteine and tyrosine rich 1 Neighboring gene uncharacterized LOC124417328 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 5 Neighboring gene uncharacterized LOC124417635

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 1; LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 1
XP_015154663.2
XP_040514721.1
XP_040514722.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    103129744..103137062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015299177.4 → XP_015154663.2  LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y1A4
    Related
    ENSGALP00010014350.1, ENSGALT00010025365.1
    Conserved Domains (4) summary
    smart00209
    Location:504 → 556
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:200 → 406
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:667 → 784
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:419 → 490
    ADAM_CR; ADAM cysteine-rich

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    103217651..103224976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658788.2 → XP_040514722.1  A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YEF2
    Conserved Domains (4) summary
    smart00209
    Location:472 → 524
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:168 → 374
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:635 → 752
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:387 → 458
    ADAM_CR; ADAM cysteine-rich

  2. XM_040658787.2 → XP_040514721.1  A disintegrin and metalloproteinase with thrombospondin motifs 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y1A4
    Conserved Domains (4) summary
    smart00209
    Location:505 → 557
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:201 → 407
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:668 → 785
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:420 → 491
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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