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SLC10A7 solute carrier family 10 member 7 [ Gallus gallus (chicken) ]

Gene ID: 422467, updated on 5-Mar-2024

Summary

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Symbol
SLC10A7provided by CGNC
Full Name
solute carrier family 10 member 7provided by CGNC
Primary source
CGNC:7605
See related
Ensembl:ENSGALG00010006564
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC10A7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (30974610..31126186, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (30926576..31078527, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 827 Neighboring gene uncharacterized LOC101749214 Neighboring gene LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene uncharacterized LOC124418360 Neighboring gene POU class 4 homeobox 2 Neighboring gene tetratricopeptide repeat domain 29 Neighboring gene uncharacterized LOC121110616

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/bile acid cotransporter 7
Names
Na(+)/bile acid cotransporter 7
solute carrier family 10 (sodium/bile acid cotransporter family), member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031131.2 → NP_001026302.1  sodium/bile acid cotransporter 7

    See identical proteins and their annotated locations for NP_001026302.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000073
    UniProtKB/Swiss-Prot
    Q5ZJH8
    Related
    ENSGALP00010009091.1, ENSGALT00010015641.1
    Conserved Domains (1) summary
    pfam13593
    Location:10 → 308
    SBF_like; SBF-like CPA transporter family (DUF4137)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    30974610..31126186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015276181.4 → XP_015131667.1  sodium/bile acid cotransporter 7 isoform X4

    Conserved Domains (1) summary
    cl19217
    Location:10 → 279
    SBF; Sodium Bile acid symporter family

  2. XM_015276179.4 → XP_015131665.1  sodium/bile acid cotransporter 7 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XSZ8
    Related
    ENSGALP00010009097.1, ENSGALT00010015652.1
    Conserved Domains (1) summary
    pfam13593
    Location:10 → 307
    SBF_like; SBF-like CPA transporter family (DUF4137)

  3. XM_015276180.4 → XP_015131666.1  sodium/bile acid cotransporter 7 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XLN1
    Related
    ENSGALP00010009089.1, ENSGALT00010015630.1
    Conserved Domains (1) summary
    pfam13593
    Location:10 → 292
    SBF_like; SBF-like CPA transporter family (DUF4137)

  4. XM_015276178.4 → XP_015131664.1  sodium/bile acid cotransporter 7 isoform X1

    UniProtKB/TrEMBL
    E1BU54
    Related
    ENSGALP00010009095.1, ENSGALT00010015647.1
    Conserved Domains (1) summary
    pfam13593
    Location:10 → 320
    SBF_like; SBF-like CPA transporter family (DUF4137)

  5. XM_015276184.4 → XP_015131670.1  sodium/bile acid cotransporter 7 isoform X5

    Conserved Domains (1) summary
    cl19217
    Location:10 → 61
    SBF; Sodium Bile acid symporter family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    30926576..31078527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915931.1 → XP_046771887.1  sodium/bile acid cotransporter 7 isoform X4

  2. XM_046915929.1 → XP_046771885.1  sodium/bile acid cotransporter 7 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XSZ8

  3. XM_046915930.1 → XP_046771886.1  sodium/bile acid cotransporter 7 isoform X3

    UniProtKB/TrEMBL
    A0A8V0XLN1

  4. XM_046915928.1 → XP_046771884.1  sodium/bile acid cotransporter 7 isoform X1

    UniProtKB/TrEMBL
    E1BU54

  5. XM_046915932.1 → XP_046771888.1  sodium/bile acid cotransporter 7 isoform X5

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZJH8.1 GenPept UniProtKB/Swiss-Prot:Q5ZJH8

Gene LinkOut

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Research Materials