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PLEKHD1 pleckstrin homology and coiled-coil domain containing D1 [ Gallus gallus (chicken) ]

Gene ID: 423260, updated on 5-Mar-2024

Summary

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Symbol
PLEKHD1provided by CGNC
Full Name
pleckstrin homology and coiled-coil domain containing D1provided by CGNC
Primary source
CGNC:51936
See related
Ensembl:ENSGALG00010021543
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PLEKHD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (27497451..27521117, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (27457616..27481282, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene microRNA 1710 Neighboring gene sushi domain containing 6 Neighboring gene coiled-coil domain containing 177 Neighboring gene solute carrier family 39 member 9 Neighboring gene enhancer of rudimentary homolog (Drosophila) Neighboring gene polypeptide N-acetylgalactosaminyltransferase 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pleckstrin homology domain-containing family D member 1
Names
pleckstrin homology domain containing, family D (with coiled-coil domains) member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    27497451..27521117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046942624.1 → XP_046798580.1  pleckstrin homology domain-containing family D member 1 isoform X4

  2. XM_046942623.1 → XP_046798579.1  pleckstrin homology domain-containing family D member 1 isoform X3

    Related
    ENSGALP00010031209.1, ENSGALT00010052246.1

  3. XM_015287589.4 → XP_015143075.2  pleckstrin homology domain-containing family D member 1 isoform X4

    Conserved Domains (2) summary
    COG1196
    Location:71 → 313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl17171
    Location:1 → 58
    PH-like; Pleckstrin homology-like domain

  4. XM_015287586.4 → XP_015143072.2  pleckstrin homology domain-containing family D member 1 isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:229 → 466
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd13281
    Location:106 → 216
    PH_PLEKHD1; Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain

  5. XM_015287585.4 → XP_015143071.2  pleckstrin homology domain-containing family D member 1 isoform X1

    Conserved Domains (2) summary
    COG1196
    Location:229 → 536
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd13281
    Location:106 → 216
    PH_PLEKHD1; Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    27457616..27481282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046919672.1 → XP_046775628.1  pleckstrin homology domain-containing family D member 1 isoform X4

  2. XM_046919671.1 → XP_046775627.1  pleckstrin homology domain-containing family D member 1 isoform X3

  3. XM_040672047.2 → XP_040527981.1  pleckstrin homology domain-containing family D member 1 isoform X4

    Conserved Domains (2) summary
    COG1196
    Location:71 → 313
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl17171
    Location:1 → 58
    PH-like; Pleckstrin homology-like domain

  4. XM_040672045.2 → XP_040527979.1  pleckstrin homology domain-containing family D member 1 isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:229 → 466
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd13281
    Location:106 → 216
    PH_PLEKHD1; Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain

  5. XM_040672044.2 → XP_040527978.1  pleckstrin homology domain-containing family D member 1 isoform X1

    Conserved Domains (2) summary
    COG1196
    Location:229 → 536
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd13281
    Location:106 → 216
    PH_PLEKHD1; Pleckstrin homology (PH) domain containing, family D (with coiled-coil domains) member 1 PH domain
Nucleotide Protein Strain
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